Panicum virgatum (switchgrass): 120649960
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Entry
120649960 CDS
T07260
Name
(RefSeq) actin-1
KO
K10355
actin, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120649960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120649960
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120649960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120649960
NCBI-ProteinID:
XP_039782843
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All DBs
Position
9K:complement(9488880..9491255)
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AA seq
377 aa
AA seq
DB search
MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYDQEMETAKTSSSVEK
SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
KAEYDESGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctgaggacatccagcccctcgtctgcgacaatggaactggtatggtgaag
gctgggttcgctggagacgatgcgcccagggccgtcttccccagcatcgtggggcgcccg
cgccacaccggtgtcatggtcgggatggggcagaaggacgcctacgtcggtgacgaggcg
cagtccaagaggggtatcctgaccctcaagtaccccatcgagcacggcatcgtcagcaac
tgggacgacatggagaagatctggcatcacaccttctacaacgagctccgtgtggccccc
gaggagcaccccgtcctcctcactgaggcgcccctcaaccccaaggctaaccgtgagaag
atgacccagatcatgttcgagaccttcaacacccccgctatgtacgtcgccatccaggcc
gtcctctcgctgtatgccagtggtcgtaccacaggtattgtgctcgactctggagatggt
gtcagccacactgtccccatctatgagggatacgccctgccccacgccatccttcgtctt
gacctggctggccgtgatctcactgactacctcatgaagatcctgactgagcgcggctac
tccttcaccaccactgctgagcgggaaattgtgagggacatgaaggagaagcttgcctac
attgccctggactacgaccaggagatggagactgctaagaccagctcctctgttgagaag
agctacgagcttcctgatgggcaggtcatcaccattggtgctgagcgcttccgctgccct
gaggtcctcttccagccatccttcattgggatggaagctgctggtatccacgagactacc
tacaactccatcatgaagtgcgacgtggatattaggaaggatctatatggcaacatcgtc
ctctctggtggtaccaccatgttccctggaattgctgacaggatgagcaaggaaatcact
gccttggctcctagcagcatgaagatcaaggtggttgctcctccagaaaggaagtacagt
gtctggattggaggatccatcttggcttccctcagcaccttccagcagatgtggatcgcc
aaggctgagtacgatgagtccggcccatccatcgtgcacaggaaatgcttctaa
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