Panicum virgatum (switchgrass): 120649968
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Entry
120649968 CDS
T07260
Name
(RefSeq) receptor protein kinase TMK1-like
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120649968
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120649968
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120649968
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: TKL group
IRAK family
120649968
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_4
LRR_8
LRRNT_2
ABC1
LRR_14
LRR_ComC
APH
PIP49_C
DUF6338
Motif
Other DBs
NCBI-GeneID:
120649968
NCBI-ProteinID:
XP_039782852
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Position
9K:9590188..9594467
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AA seq
966 aa
AA seq
DB search
MPSPTASTARRRRRRAGAAGLWCAPALLALMALAVGAAADTSASEVAAMRAVAKAMGADK
TLGWDIAGDPCSPKPWDRVACDSGHVTAIQVGGRGLKGTLAPEVRNLTALTRLEVYGNFL
DGPLPSLAGLSSLQVLLARDCNFTAIPADFFKGLTELVAVDIDHNPFAPWTLPNDLAACN
NLQNFSANGANISGTLPDFFGSIPSLQRLSLSYNYLSGPVPASLAGVQLVQLWLNNQNGS
SFNGSISFVRNITSLQQLWLQSNSFTGPLPDFTGFDNLWDLQLRDNKLTGPVPDSLVKLK
SLKKLTLTNNLLQGPMPEFSGDLKPDLVATSERFCLQEPGKPCDPRVSLLLEVAAGFMYP
SSLAENWKGNDPCNTFVGVGCNLQGNITRLSLANMGLSGSIPPAIAKIGSLQVLILANNN
ITGTVPEEVASLPSLREVDLTNNNIYGKLPTFASKNVTLKTAGNPNIGKDAPTPTAGSGG
TGSDSPSGRGSSGSSGSNEGSSSSSVGVIAGSVIGAVAGLGLVAALGFYCYKRKQKPFGR
VQSPHAMVIHPRHSGSDDMVKITVAGGDANGGARASETYSQASSDPRDIHVVESGNMVIS
IQVLRNVTNNFSEHNILGRGGFGTVYKGELHDGTKIAVKRMEAGVMGNKGLNEFKSEIAV
LTKVRHRNLVSLLGYCLDGNERILVYEYMPQGTLSQHLFEWSENNLRPLEWKKRLSIALD
VARGVEYLHSLAQQTFIHRDLKPSNILLGDDMKAKVADFGLVRLAPADGKCVSVETRLAG
TFGYLAPEYAVTGRVTTKADVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMQLNK
DTFRKAIDPVIDLDEETFASVSTVSELAGHCCAREPHQRPDMGHAVNVLSTLSDVWKPTD
PDSDDSYGIDLDMTLPQALKKWQAFEDSSHFDGATSSFVASLDNTQTSIPTRPPGFAESF
TSADGR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcccaccgcctccacagcgcggcggcggcggcggcgcgcgggcgccgccggc
ctgtggtgcgcgcccgcgctgctggccctgatggcgctcgcggtcggcgcggcagcggac
acctcggcgtcggaggtggcggcgatgcgggcggtggcgaaggcgatgggcgcggacaag
acgctgggatgggacatcgccggcgacccctgctcccctaagccgtgggatcgggtggcc
tgcgactcgggccacgtcaccgcgatccaggtcgggggacgcggcctgaaggggaccctg
gccccggaggtgcgcaacctcaccgcgctcacccgcctcgaggtctacgggaacttcctc
gacggcccgctgccctcgctcgcggggctctcctcgctccaggtacttctggcccgcgac
tgcaacttcaccgccatccccgccgacttcttcaagggcctcaccgagctcgtggctgtc
gacatcgaccacaacccgttcgcgccgtggacgctccccaacgacctcgccgcctgcaac
aacctccaaaacttctccgccaacggcgccaacatctccggcacgctcccagacttcttc
ggctcgataccgagcctacagcggctgtcgctgtcctacaactatctctcagggcccgtg
ccggcgtcgctggccggcgtgcagttggtgcagctctggctcaataaccagaacgggagc
agtttcaatgggtcgattagctttgtccgcaacataacgtctctgcagcagctgtggctg
caatctaactccttcactgggcccttgccggacttcacagggtttgataatctgtgggat
ttgcaacttcgcgacaacaagctcacagggccagtaccagacagtcttgtcaagttgaaa
tctctgaagaagttgaccctgacgaataatttgctgcaagggccgatgcctgagttttct
ggtgatctgaaacctgatttggtcgcaacatcagagcggttctgcttgcaggaacctgga
aagccgtgcgatccccgagtgagcctgctgcttgaggtggctgctgggttcatgtaccca
agctcgcttgcagaaaattggaaagggaatgatccatgtaatacttttgttggtgttgga
tgcaatttacaagggaacattactaggctgtctttagccaacatgggtctcagtgggagt
attcctcctgccattgcgaagattggctcacttcaggtgctgattcttgctaataacaac
atcactggtactgtaccagaggaggttgcctcattgccttcactgagagaagttgatttg
acaaacaacaatatttatgggaaactccctacctttgcttccaagaatgtaaccttgaaa
actgctggcaacccaaacataggcaaggatgctcccacaccaacagctggatcaggcggt
actggcagtgacagtccatcggggcgaggcagtagcggaagcagtggaagcaatgaggga
tcctcttcatcttctgttggggtcattgcaggctcagtgattggtgcagttgctggactg
ggccttgttgctgcactaggattctattgttacaagagaaagcagaagccttttggaagg
gtgcagagtccacatgccatggtcatccatccacgccactccggttcagatgacatggtt
aaaatcacagttgcagggggagatgccaatggcggtgctcgagcaagcgagacatatagc
caagcaagcagcgatccacgggacatccatgttgttgaaagtggaaatatggtcatttca
atccaagttctccgcaatgtgacaaacaacttcagtgagcataacatcttaggacgaggt
gggtttggcactgtttacaagggtgagcttcacgatggcacaaagatagctgtgaagcgg
atggaggctggtgtgatgggtaacaaggggctaaatgagttcaaatcagagattgctgtg
ctgaccaaggtccgtcaccggaaccttgtgtcactgcttggctattgccttgatggcaat
gagaggattcttgtgtatgagtacatgccacaggggacactgagccaacacctgtttgag
tggtccgagaataatttgcggccattggaatggaaaaagcgactgagcattgcacttgat
gttgcaaggggtgttgagtacctccacagccttgctcagcagacttttatccatagagac
ttgaagccatcaaatatacttcttggcgacgacatgaaggcaaaggtggctgattttgga
ttggtcaggcttgcaccagctgatgggaagtgtgtctcagtggagacaagacttgctggc
acgtttgggtaccttgccccagagtatgcagttactggacgagtaacgacaaaagctgat
gtcttcagctttggcgtcatcttgatggaactgattactggacgcaaggcacttgatgaa
actcagcctgaggatagcatgcacttagttacatggttccggagaatgcagctcaacaaa
gacacgttccgtaaagcaatcgaccctgttattgatcttgacgaggagacatttgctagt
gttagcactgtttcagagcttgctggtcactgctgtgctagggaaccacaccagaggcct
gacatgggccatgctgtcaatgtgctctctaccctttcagatgtgtggaaaccaaccgat
ccagactcagacgacagctatggtatcgaccttgacatgacgctgcctcaggcgctgaag
aaatggcaagccttcgaggatagcagccattttgatggcgcgacttcttcgtttgttgca
agcttggacaacactcagacaagcatccctacaaggcctccaggatttgctgagtcgttc
acctctgctgatggaaggtag
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