Panicum virgatum (switchgrass): 120649995
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Entry
120649995 CDS
T07260
Name
(RefSeq) threonine dehydratase 1 biosynthetic, chloroplastic-like
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00290
Valine, leucine and isoleucine biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120649995
00290 Valine, leucine and isoleucine biosynthesis
120649995
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
120649995
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Motif
Pfam:
PALP
Thr_dehydrat_C
Motif
Other DBs
NCBI-GeneID:
120649995
NCBI-ProteinID:
XP_039782883
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Position
9K:complement(9886828..9891573)
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AA seq
607 aa
AA seq
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MAAAATASASAAFPAASPLRRDGRRPSRVAVSAAATTPAEAASAALAAAPAAPAPMVRVA
PESLQRESGCLVAGFRERNAGAADGEGFGGDGGAAGGGGPGAMEYLTSVLSSKVYDVAIE
SPLQLATKLSDRLGVNLWIKREDLQPVFSFKLRGAYNMMAKLSPEQLERGVICSSAGNHA
QGVALSAQRLGCDAVIVMPVTTPEIKWKSVERLGATVVLEGDSYDEAQSYAKLRCEQEGR
TFIPPFDHPDVITGQGTVGMEIVRQLQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKII
GVEPSDANAMALSLCHGKRVMLEHVGGFADGVAVKTVGEETFRLCRELVDGIVMVRRDAI
CASIKDMFEEKRSILEPAGALALAGAEAYCKYYNLKGETVVAITSGANMNFDRLRLVTEL
ADVGRKREAVLATFLPEEQGSFKRFAELVGRMNITEFKYRYDSNAKDALVLYSVGIYTNN
ELGAMVNRMESAKLRTVNLTDNDLAKDHLRYFIGGRSEIKDELVYRFIFPERPGALMKFL
DAFSPRWNISLFHYRGQGEAGANVLVGIQVPPQDFDEFKSCADSLGYEYMSEHNNEIYRL
LLRDPNI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccaccgcctctgcctcggccgccttccccgcggcctcccccctccgc
cgcgacggccgcaggccctcccgcgtggccgtcagcgccgcggcgacgacgcccgcggag
gcggcgtcggcggcgctcgcggccgccccggcggcgccggcgccgatggtgcgggtggcg
ccggagtcgctgcagagggagagcgggtgcctcgtggcggggttccgggagcgcaacgcg
ggcgcggcggacggggaggggttcggtggggacggcggcgcggcggggggaggagggccc
ggcgcgatggagtacctgaccagcgtgctgtcgtccaaggtgtacgacgtggcaatcgag
tcgccgctgcagctcgccaccaagctctccgaccgcctcggggtcaacctctggatcaag
cgcgaggacctgcagccggtattctcattcaagttgcggggtgcatataatatgatggca
aaactctctcctgagcagttggagaggggcgtcatctgctcctctgctggaaaccatgct
cagggagttgctctttctgctcagagactgggatgcgatgccgtcatcgtcatgccggtg
acaacaccagaaatcaagtggaaatcagtggagaggttgggtgcaacggtagtcctcgag
ggggactcatacgatgaagctcagtcatatgcaaaactacgatgcgagcaggagggtcgc
acgttcatacctccatttgaccatcctgatgttatcactggacaaggaactgtcggcatg
gaaattgttaggcaactgcaaggtccactgcatgcaatatttgtacctgtgggaggtggc
ggattaatcgctggtattgctgcctatgtgaaacgggttcgcccagaggtgaaaataatt
ggagtagaaccctcagatgcaaatgcaatggcattgtccttgtgtcatggcaagagggtc
atgttagagcatgttggtggtttcgcagatggtgtagcagtcaaaactgtaggggaggaa
acatttcgcctgtgtagagaactggtagatggcattgttatggtcagacgagatgctatt
tgtgcttctataaaggatatgtttgaggagaaaagaagtatccttgaacctgctggagcc
cttgcactggcaggggctgaagcctactgcaaatactataacttgaagggagaaactgtg
gttgccataactagtggagcaaatatgaactttgaccgacttagactagtaactgaactt
gctgatgttggtcgaaagcgtgaagcagttctagccacatttttaccagaggagcagggg
agcttcaaacgatttgcagaattggttggccggatgaatattactgaatttaaatacaga
tatgattctaatgctaaagatgcccttgttctttacagcgttggcatctacacaaacaac
gagcttggagcaatggtgaatcgaatggaatctgcgaaactgaggactgttaaccttaca
gacaatgatttagcaaaagaccaccttagatactttattggaggtagatcagaaataaag
gatgaacttgtttaccggttcatttttccagaaaggcctggggccctcatgaaatttttg
gatgcattcagtcctcgttggaatatcagccttttccattatcgtggacagggtgaagct
ggagcaaatgtattagttggcatacaagtgccaccgcaagacttcgatgaattcaagagt
tgtgctgacagtcttgggtacgagtacatgtcagagcacaacaatgagatataccggctg
ctgttgcgtgatccgaacatttaa
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