Panicum virgatum (switchgrass): 120650018
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Entry
120650018 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP2
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120650018
04141 Protein processing in endoplasmic reticulum
120650018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120650018
04131 Membrane trafficking [BR:
pvir04131
]
120650018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120650018
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
120650018
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120650018
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120650018
Autophagy
ER-phagy
ER stress-related proteins
120650018
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120650018
Exosomal proteins of other body fluids (saliva and urine)
120650018
Exosomal proteins of colorectal cancer cells
120650018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
120650018
NCBI-ProteinID:
XP_039782907
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All DBs
Position
9K:complement(10200602..10202773)
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AA seq
681 aa
AA seq
DB search
MTKHSHSALALVLLSLLCTAGFLCGLADGAEAAAKGKKGGKAAASGPVIGIDLGTTYSCV
GVYRNGHVDIIANDQGNRITPSWVAFTDDERLVGEAAKNQAPLNPRRTIFGIKRLIGRRF
DDEEVQRDLRYLPYKVVDRGGKPYVEVPLSGGEAKAFSPEEISAVILSKMRETAESFLGR
RVTDAVVTVPAYFNDAQRQATKDAGTIAGLNVPRILNEPTAAAIAYGLNRKGAEMMNVLV
YDLGGGTFDVSVLSLDRGVFEVLATAGDTHLGGEDFDQRVMDHFIRLIRRKHGRDISGDG
RALGKLRRECERTKRALSSQHQVRVEIESLFDGVDFSEPLTRAKFEELNMDLFKKTLGPV
KKAIADAKLKKTDIDEIVLVGGSTRIPKVQELLTEFFDGKEPNKGINPDEAVAYGAAVQG
SIISGEGGAETKDILLLDVTPLTLGIETAGGVMTKLIPRNTRIPVKKSQVFTTYEDHQTT
VSIKVFEGERSLTRDCRELGRFDLTGIPPAPRGVPQIEVTFEVDENGILHVTAADKAGGR
SKSITITNDKGRLSQEEIDRMVREAEEFAEEDRRVRERVDARNRLENYVHRMRAAVKDGG
GVAGKIGEEDRERMEAALAEALEWLEEQDGGARTAEKEDYEEKLREVEEVCGPIIKQVYE
KSGGGAGGSAGAADEDDVNEL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcactcgcactctgctctagctctcgttctgctctctcttctctgcacagct
gggttcttgtgcgggttggccgatggcgcggaggcggcggcgaaggggaagaaagggggg
aaggcggcggcgtcggggccggtgatcggcatcgacctgggcaccacgtactcgtgcgtc
ggggtgtaccggaacgggcacgtggacatcatcgccaacgaccagggcaaccggatcacg
ccgtcgtgggtggccttcaccgacgacgagcgcctcgtcggcgaggccgccaagaaccag
gcgccgctcaacccgcggcgcaccatcttcggcatcaagcgcctcatcggccggcggttc
gacgacgaggaggtgcagcgcgacctccggtacctgccgtacaaggtggtggaccggggc
ggcaagccctacgtggaggtgcccctgagcggcggcgaggccaaggcgttcagccccgag
gagatcagcgccgtgatcctgtccaagatgcgggagacggccgagtccttcctcggccgg
cgcgtcaccgacgccgtcgtcaccgtgccggcctacttcaacgacgcgcagcggcaggcg
accaaggacgccggcaccatcgcggggctcaacgtgccgcggatcctcaacgagcccacc
gcggcggcgatcgcgtacgggctgaacaggaagggcgccgagatgatgaacgtgctggtc
tacgacctcggcggcggcaccttcgacgtgagcgtgctcagcctcgaccgcggcgtcttc
gaggtgctcgccaccgccggcgacacgcacctcggcggcgaggacttcgaccagcgcgtc
atggaccacttcatccgcctcatccggcggaagcacggcagggacatcagcggggacggc
cgcgcgctcggcaagctccgccgcgagtgcgagcgcaccaagcgcgcgctcagcagccag
caccaggtgcgcgtcgagatcgagtccctgttcgacggcgtcgacttctccgagccgctg
acgagggccaagttcgaggagctcaacatggacctcttcaagaagacgctgggccccgtc
aagaaggccatcgccgacgccaagctcaagaagaccgacatcgacgagatcgtgctcgtc
ggcggcagcaccaggatccccaaggtgcaggagctcctcaccgagttcttcgacggcaag
gagcccaacaaggggatcaaccccgacgaggccgtcgcgtacggtgccgccgtccagggc
agcatcatcagcggcgagggcggcgccgagaccaaagacatcttgctgctggacgtgacg
ccgctgacgctgggcatcgagacggccggcggcgtgatgacgaagctgatcccgcggaac
acgaggatcccggtgaagaagtcgcaggtgttcacgacctacgaggaccaccagacgacg
gtctccatcaaggtgttcgagggcgagcggagcctgaccagggactgccgcgagctgggg
cgcttcgacctgacgggcatcccgccggcgccccgcggcgtgccgcagatagaggtcacc
ttcgaggtggacgagaacggcatcctccacgtgaccgccgcggacaaggccggcggccgg
tccaagtccatcaccatcaccaacgacaagggccggctcagccaggaggagatcgaccgg
atggtgcgcgaggccgaggagttcgccgaggaggaccgccgcgtccgggagcgcgtcgac
gcgcggaaccgcctcgagaactacgtgcaccggatgagggccgccgtgaaggacggcggc
ggcgtggctgggaagatcggcgaggaggaccgggagaggatggaggccgccctggcggag
gcgctggagtggctcgaggagcaggacgggggcgcccggacggccgagaaggaggactac
gaggagaagctgagggaggtggaggaggtgtgcggccccatcatcaagcaggtgtacgaa
aagagcggaggcggcgctggcgggtcggccggcgccgcggacgaggacgacgtgaacgag
ctgtag
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