Panicum virgatum (switchgrass): 120650022
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Entry
120650022 CDS
T07260
Name
(RefSeq) homologous-pairing protein 2 homolog
KO
K06695
26S proteasome regulatory subunit, ATPase 3, interacting protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120650022
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
120650022
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Gene cluster
GFIT
Motif
Pfam:
TBPIP
LZ3wCH
Penicillinase_R
DUF7342
EIF3I
Mis12
DUF2730
MCM5_C
DUF1664
Uds1
DUF7625
CAP12-PCTIR_TIR
MarR_2
HTH_41
tRNA-synt_1c_C
Golgin_A5
Nup49_C
APC_N_CC
TINF2_N
DUF7610
Motif
Other DBs
NCBI-GeneID:
120650022
NCBI-ProteinID:
XP_039782915
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All DBs
Position
9K:10226933..10229831
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AA seq
227 aa
AA seq
DB search
MPPKSDSVEGIVLGFVNEQNRPLNSQNVADALQKFNLKKTAVQKALDALADSGQISFKEY
GKQKIYIARQDQFDIPNGEELEEMKKANAKLQEELADQKKAISEVESEVRGLQSNLTLAE
IKSKETKLQSEVQEMEEKLDKLQSGVILVKPEDKKIIEDSFAEKVNQWRKRKRMFKELWD
NITENSPKDQKEFKEELGLEYDEDVGVNLQSYTDMLASLNKRRKISR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaatcggatagcgtcgaaggaatcgtcctgggtttcgtcaatgagcaaaac
aggccattgaattcacagaatgtagctgacgcgctacagaagtttaatctgaagaaaact
gcagtacaaaaggcactggatgcattggccgatagtggacagatttccttcaaggagtat
ggcaagcagaaaatttacattgctcggcaagatcaatttgacattccaaatggggaagaa
cttgaggagatgaagaaagcaaatgccaagttgcaggaagaacttgcagatcaaaagaaa
gcaattagtgaggttgaatctgaggtacgaggtctgcaatcaaacttgacactggcagag
attaagtcaaaggagactaaattacaaagcgaagtccaggaaatggaagagaaactcgat
aaattgcagagtggtgtcatcttggtgaaacctgaggacaagaagatcattgaggattct
tttgctgaaaaagttaaccaatggagaaagcggaagaggatgttcaaggagctttgggat
aatattactgagaatagcccaaaagatcagaaggaatttaaggaagagcttggccttgag
tatgatgaagatgttggcgtgaacctgcagtcttacactgacatgctggcaagtcttaac
aagaggcgtaaaatttctcgctga
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