Panicum virgatum (switchgrass): 120650053
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Entry
120650053 CDS
T07260
Name
(RefSeq) oxysterol-binding protein-related protein 1C-like isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650053
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
120650053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
120650053
NCBI-ProteinID:
XP_039782944
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Position
9K:complement(10642948..10652154)
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AA seq
801 aa
AA seq
DB search
MHPFCCAPLVPVSPAASAASAAAASSAVAGAPAMMPPPQPPPLPPPPPRSNSAPVGERRA
RAAGASGGGGGGSSPPEGVKLNEIVGGGISGILYKWVNYGRGWRPRWFALHDGVLSYYKI
HGPDRIVLSRETERGAKVIGEDSLRRLNRPSTSSSSHSNGHHQPRNPIGEIHLKVSTVRE
SRSDDKRFSIFSGTKTLHLRAETREDRAAWLEALRATKDMFPRMSSSEMVEPGDTAAAVA
VSTERLRQRLQQEGVSEAAIADSEKIVRAEFEALHKQLVLSKQKHALLVETLRQLETEKV
DLENTLVDESQRQSKEYGSASKSRHDKYSEGSASESDDYNEPQDPAEETDDDENIYFDTR
DFLSSSSFKSSGSDFQRSEGGSDDEDDYPMDGIDPSMKSVGISYPYVRRRKKLPDPVEKE
KGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLIDRASEWGKRGNSLM
RILSVAAFAVSGYASTDGRSCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCE
GTGWRFWADSNLKSKFWGRSIQLDPVGALTLEFEDGEVFQWSKVTTSIYNLILGKLYCDH
YGTMRIQGNREYSCKLKFKEQSIIDRNPHQVQGVVQDRSGRTVATLFGKWDESMHYVMGD
CFGKGKGSEQFSEAHLLWKRSKPPKFPTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPD
QRCLENGEYERANAEKLRLEQRQRQARKMQESGWKPRWFAKDKATDTYRYTGGYWESREK
GSWDGCPDIFGQVPNDLMITD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcacccattctgctgcgcgccgctcgtgcccgtgtcgcccgcggcctccgccgcctcc
gccgcggccgcgtcctccgcggtggcgggcgccccggcgatgatgccgccgccgcagccc
ccgccgctgccgcctccgccgccgcgaagcaactctgctcccgtcggtgagaggcgggcg
cgcgcggcgggggcgagcggtggcggaggaggcggttcctcgccgcccgagggagtgaag
ctgaacgagatcgtcggcggcggcatctcgggaatcctgtacaagtgggtcaactacggg
cgcgggtggaggccgcgctggttcgcgcttcacgacggcgtgctctcctactacaagatc
cacgggcccgaccgcatcgtcctctcgcgcgagaccgagcggggcgccaaggtcatcggc
gaggactccctccgccgcctcaaccgcccctccacctcctcgtcctcccactccaacggc
catcatcagcctcgcaaccccatcggcgaaatccacctcaaggtgtcaactgtgagggag
agtagatcggacgacaagagattctcgatcttctcgggcacgaagacgctgcacctgcga
gcggagacaagggaggacagggcggcatggctggaggcgctgcgagcgaccaaggacatg
ttcccgaggatgtcatcgagcgagatggtcgagccaggggacaccgcagcagccgtggct
gtctcaaccgagcgcctaaggcagcggctgcagcaggaaggggtcagcgaggcggccatt
gctgacagcgagaagatcgtgcgggcagaattcgaggctctgcacaagcaacttgtgctc
tccaagcagaagcatgcgcttctcgtggaaacacttcgccagctagagacagaaaaggtt
gatttggagaatacccttgtcgatgagagccaaagacagtcgaaagagtatggatctgct
tctaaatcaaggcatgacaagtatagtgaaggaagtgctagtgaatctgatgattataat
gaaccacaagatcctgctgaagagactgatgatgatgagaacatttactttgataccaga
gattttctatcatcaagctcttttaaaagtagtggatctgattttcaaagatctgaaggt
ggttcagatgatgaagatgattatccaatggatggaattgatccttccatgaagtctgtt
ggaattagttatccatatgtaagaagacggaagaagctaccagatccagttgagaaagag
aagggtgtaagcttgtggtcaatgatcaaggacaacataggaaaggatctcacgaaagtc
tgtctgccagtttacttcaatgagccactctcatcattgcaaaaatgttttgaagatctt
gagtactcctaccttattgatcgcgcatctgaatgggggaaaagggggaatagtcttatg
aggattcttagcgtagcagcttttgctgtttctggatatgcctctacagatgggagaagc
tgtaagccctttaatccccttcttggggagacatatgaagcagattatccggacaaaggc
ctccgttttttctctgaaaaggttagtcatcatcctatggttgttgcatgccactgtgag
ggaactggctggaggttttgggctgatagcaacctaaagagcaaattctggggtcgttca
attcagcttgatccggttggtgcattgacactggagtttgaggatggtgaagttttccag
tggagcaaggtgactacctcaatttacaatcttatattgggcaaactgtactgtgatcac
tatggcactatgcgcattcaaggtaatcgtgagtattcatgtaagctgaagttcaaggag
cagtccataatcgatcgcaatcctcaccaggtgcaaggtgttgttcaagacagaagtggt
cgaactgttgctacactatttggaaagtgggatgaaagtatgcactatgtaatgggtgat
tgctttgggaaaggcaagggatctgaacagttctcagaggcgcatttgctgtggaaaaga
agcaaaccacctaagtttcccactagatacaatctcactagctttgcaattacattgaat
gaacttacccctggattgaaggagaaactgccaccgacagactcaagattacgaccagat
cagagatgtctggagaatggtgaatatgaaagggcaaatgctgagaagttgaggcttgaa
cagaggcagcggcaggcacgaaagatgcaggagagcgggtggaagcctaggtggtttgcg
aaggacaaagctactgacacataccgttacactggtggttactgggaatccagagaaaaa
ggcagctgggatggctgccctgacatcttcggacaagtccctaacgatctgatgataact
gactag
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