Panicum virgatum (switchgrass): 120650056
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Entry
120650056 CDS
T07260
Name
(RefSeq) histone-lysine N-methyltransferase ASHR1-like isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00310
Lysine degradation
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120650056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120650056
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
120650056
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
120650056
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120650056
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
MYND_ZMYND11_ZMYD8
TPR_10
YnfU
Motif
Other DBs
NCBI-GeneID:
120650056
NCBI-ProteinID:
XP_039782954
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Position
9K:10676330..10681125
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AA seq
509 aa
AA seq
DB search
MITSNTTRLFLCETSGSGRGRMANWAEQLQRELAGRGLAVASIPGKGRGLVASRTFFPGE
VIISQEPYASTSNKILVGSSCDHCFASDNLRKCSVCRVTWYCSSDCQKVEWKLHQLECRA
MAALTEDRKKMLTPTIRLMVRLVLKRKLQNEKVIPSSCIDNYYLVDALESHISEVDENQL
VLYAQMANLVDLILPSVELDLKEIAHTFSKFACNAHTICDSELRPLGTGLYPVISIINHS
CVPNAVLTFDGRTAYVRALQPIGKDEEVSISYIETAAVTKKRQNDLKQYFFTCTCPRCVK
GSEDDALLESYRCKNQACDGFLLPESGEKAYTCQKCSISRDEEEVKKMTREIVLLSDKAS
SLLKSGRKIDTTEAGSIYKTIEQLEQKLYHAFSITLLHTRETLLKIYMELQDWQTALTYC
KSTIPVYERVYPPFHPMIGLQFYTCGKLEWLLECTEDALKSLTKAADILRITHGTKSQFM
KELFGKIEEARAEVSFRLSSGPGHDEQFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtcgaacaccactcgcctgtttctttgcgaaacttctggttctgggcgcggg
aggatggcgaattgggcggagcagctgcagcgcgagctcgccggccgcggcctcgccgtc
gcctccattcccggaaagggacggggcctcgttgcctcccgcaccttcttcccaggggaa
gtcattatcagccaagaaccttacgcttctacatccaacaagattttagtcggatcaagc
tgcgaccattgtttcgcgtctgacaacctgaggaagtgctcggtttgccgagttacttgg
tactgcagcagcgattgccagaaagtagaatggaaactacatcagctcgagtgtagagcg
atggcagcgcttacggaggacagaaaaaagatgcttactcccacaattcgtttgatggtg
aggctggtactgaaaagaaaattgcaaaatgagaaggtcattccatcttcatgcattgat
aactactatctagtggatgccttggagtcccatatatcggaggttgatgaaaatcaactt
gtactctatgctcagatggccaatcttgtggacctcattcttccttcggttgaacttgat
cttaaggaaattgcacatactttttctaagtttgcctgcaatgctcatacaatatgtgat
tctgagcttagacctcttgggactggattgtaccctgttatatctataattaaccacagt
tgtgtaccaaatgcagttctgacatttgatggtcggacagcttatgttcgcgctttgcaa
cctatagggaaagatgaagaggtgtcgataagctacatcgagactgcagcagtaactaag
aagagacagaatgatctgaagcagtacttcttcacctgcacatgcccacgctgtgtcaag
ggttctgaagacgatgctctacttgagagttatagatgcaagaaccaagcatgtgatggg
tttctgctgcctgagtcaggagaaaaggcttacacatgccagaaatgtagcatttctaga
gatgaggaagaggtcaaaaagatgacaagagaaattgtactgctatcagataaagcatct
tcacttcttaagtcaggaaggaaaatagataccactgaagcaggttctatctacaagaca
attgagcagttagagcagaagctctaccatgctttctcaatcactttgctgcacacacgt
gaaacactgctgaagatatacatggagttacaagattggcagactgcattgacgtattgc
aaatcaacaattcctgtttatgaaagagtttatccaccatttcatccaatgatcggatta
caattctatacttgcggaaagcttgaatggctgctcgagtgcacagaggacgctctgaaa
tctctaaccaaggccgcagatatacttagaataacacatggcacaaaatcacagttcatg
aaggagctctttggcaagatagaggaagcaagggctgaagtttcttttaggctatcctcc
ggtcctgggcatgatgagcaattttcatga
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