Panicum virgatum (switchgrass): 120650125
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Entry
120650125 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like isoform X1
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120650125
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120650125
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Porin_7
Motif
Other DBs
NCBI-GeneID:
120650125
NCBI-ProteinID:
XP_039783078
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Position
9K:11337002..11343173
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AA seq
596 aa
AA seq
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MRRPRRCGGLRPLLLLLPFAALLSVATFSLHSPDRLLVTVTARRPSSSPHHLHRLAVSSL
EARALGLGGAPPLHADAARAFRSGGRLLRDVLSSPAPPPSAAAGATRRCPPSVVVSGARL
RDTGGGGGVLSLPCGLALGSHVTVVGSPRRRGDVAQFAVELRGEGDGDTAPRILHFNPQL
RGDWSGRPVIEQNTRFRGQWGPALRCEGRRSRPDEETVDGLVKCEEWSGNIGDTSKELKR
FRLQNHITGQKSRNWIDWPYPFIEDELFVLTLSTGLDGYHFHVDGKHVTSFPYRFGFVLE
DATILSVIGDIDVQSIVAGSLPTAHPSIVQRNLELLTELKAPPLSEENVELFIGILSAGN
HFTERMAARRSWMSSVRNSSSTVARFFVAVNGRREVNEDLLKEADFFGDIVIVPFADSYD
LVVLKTIAVCDYAARVVPAKYVMKCDDDTFVRLDSVMAEVKKISDGRSFYLGNMNYFHRP
LREGKWAVSYEEWPIEEYPPYADGAGYIVSSDIANFVASEMEKGRLNLFKMEDVSMGMWV
GRFNSSGNAVAYVHSPRLCQSGCADDYLTAHYQSPAQMVCLWEKLLQGRPQCCNAR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggccgcgccgctgcggcggcctccgcccgctgctgctgctcctacccttcgcc
gcgctcctgtccgtcgctaccttctccctccactcccccgaccgcctcctcgtcactgtc
acggcgcggcggccgtcctcgtcaccccaccacctgcaccggctggccgtctcgagcctc
gaagcgcgcgcgctcggcctaggaggcgccccgccgctccacgcggacgccgcgcgcgcg
ttccggtccggcgggcgcctcctccgcgacgtcctctcctcccccgcgccgccgccctcg
gccgctgccggcgcgacgcggcggtgcccgccctctgtcgtggtgtcgggcgcgcggctc
cgggacacgggtggcggtggcggcgtcctgtccctgccctgcgggctggcgctggggtcg
cacgtgacggtggtgggctcgccgcggcgccgcggggacgtggcgcagttcgcggtggag
ctgcgcggggaaggggacggggacacggccccaaggatcctccacttcaacccgcagctc
cgcggggactggagcggccggccggtgatcgagcagaacacccgcttccgtggacaatgg
ggacccgcgctccggtgcgagggccgtcggtcgcgcccggacgaggagaccgtagatgga
ttggtgaaatgcgaggaatggtctggaaacattggggacacatcaaaggagttgaagaga
ttcaggttgcagaaccatatcactggacagaagagcagaaattggatagattggccatat
ccgttcattgaggatgaattgtttgttctaacactgagcactggtttggacggctaccat
tttcatgttgacgggaagcatgtcacttcttttccttaccgttttggctttgttcttgag
gatgccactatcttgtctgtgattggcgacattgacgttcaatcaatagtagctggttca
ttaccaacagctcaccctagcattgttcaaagaaatctggagttgctaacagaactaaaa
gcccctcctctttctgaagagaatgtagagctattcataggcattctttcagcgggtaat
catttcactgaacgcatggccgcgaggagatcttggatgtcttcagtacgaaattcctcc
agcactgtggctcggttttttgttgcagtgaatggcagaagggaagtgaatgaagatttg
ctgaaagaggcagatttcttcggggacatcgtcattgtgccttttgcggatagttatgat
ctggtggttctgaagactattgccgtttgcgactatgcggctcgtgttgttccagcgaag
tatgttatgaagtgtgatgatgatacctttgttagacttgattcagtgatggctgaagtt
aagaaaatctcagacggcagaagcttttatttggggaacatgaattacttccaccggcca
ctgcgagagggaaaatgggctgtctcatacgaggagtggcccatagaagagtacccgccc
tacgctgatggtgcaggctacattgtttcttctgacattgcaaacttcgtcgcatctgaa
atggagaagggaagactaaatctgttcaagatggaggatgtgagcatggggatgtgggtt
gggcggttcaacagctccgggaacgccgtggcgtacgtccacagccccaggttgtgccag
tccggctgcgccgacgactacctgaccgcccactaccagtcgccggcgcagatggtgtgc
ctctgggagaagctgctacaagggaggccgcagtgctgcaacgcaaggtga
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