Panicum virgatum (switchgrass): 120650143
Help
Entry
120650143 CDS
T07260
Name
(RefSeq) ras-related protein Rab5A
KO
K07887
Ras-related protein Rab-5A
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120650143
04145 Phagosome
120650143
04148 Efferocytosis
120650143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650143
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120650143
04031 GTP-binding proteins [BR:
pvir04031
]
120650143
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120650143
Endosome - Lysosome transport
120650143
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120650143
Exosomal proteins of other body fluids (saliva and urine)
120650143
Exosomal proteins of colorectal cancer cells
120650143
Exosomal proteins of bladder cancer cells
120650143
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120650143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_24
AAA_16
AAA_22
TsaE
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
120650143
NCBI-ProteinID:
XP_039783103
LinkDB
All DBs
Position
9K:complement(12926461..12930589)
Genome browser
AA seq
203 aa
AA seq
DB search
MAANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV
KFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNLASFTRAKKWVQELQAQGNPNTIVA
LAGNKADMLDARQVPAEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQQDPS
PQAGMVLNQRPNERMVSSSSCCS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgccggcaacaagatccgcaacgccaagctggttcttcttggagatgtg
ggcgctggcaaatctagtttggttcttcggtttgtgaaaggacagtttgttgaattccag
gaatcaacgattggagcagctttcttctctcagaccttggcggtcaatgatgagactgtt
aagtttgaaatctgggatactgctgggcaagagaggtaccatagcttggcacccatgtac
tataggggtgctgctgccgccatcgttgtctacgacattacgaatctggcctccttcact
cgtgcgaagaaatgggtccaagaacttcaagctcaaggaaacccgaatacaatagtggct
cttgctggcaacaaagctgatatgctagatgcaaggcaggtgccagcagaggaagcaaaa
acatatgcacaggagaatggacttttcttcatggagacatctgccaaaactgcgatcaat
gtgaatgacatattttatgagatcgcaaagagactgctccaagggcaacaggatccaagc
ccacaggctggaatggttctgaaccaaagaccaaatgagagaatggtcagcagttcttca
tgctgctcttga
DBGET
integrated database retrieval system