KEGG   Panicum virgatum (switchgrass): 120650164
Entry
120650164         CDS       T07260                                 
Name
(RefSeq) tubulin beta-3 chain-like
  KO
K07375  tubulin beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04517  IgSF CAM signaling
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120650164
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120650164
  09142 Cell motility
   04814 Motor proteins
    120650164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120650164
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120650164
   04147 Exosome [BR:pvir04147]
    120650164
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120650164
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120650164
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120650164
  Exosomal proteins of colorectal cancer cells
   120650164
  Exosomal proteins of bladder cancer cells
   120650164
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120650164
NCBI-ProteinID: XP_039783120
LinkDB
Position
9K:complement(13229888..13233784)
AA seq 445 aa
MREILHIQGGQCGNQIGAKFWEVICGEHAVDSTGRYSGSSAQQLERINVYYNEAGGGRYV
PRAVLMDLEPGTMESIRAGPFGGIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDAVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVG
LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEEYDDEEVDGEEDHA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggcggccagtgcggcaaccagatcggcgccaagttc
tgggaggtgatctgcggggagcacgccgtcgactccacgggccgctactcggggtcctcc
gcgcagcagctcgagcggatcaacgtctactacaacgaggccgggggcggccgctacgtg
ccccgcgccgtgctcatggacctcgagcccggcaccatggagtccatccgcgccggcccc
ttcggcggcatcttccgccccgacaacttcgtctacggccagtccggcgccggcaacaac
tgggccaagggccactacaccgagggcgccgagctcatcgacgccgtcctcgacgtcgtg
cgcaaggaggccgagaactgcgactgcctccaagggttccaagtatgccactccctgggt
ggaggcacgggatccggcatgggcaccctgctcatctccaagatccgcgaggagtacccc
gaccgcatgatgctcaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtg
gagccctacaacgcgacgctgtccgtgcaccagctggtggagaacgcggacgagtgcatg
gtcctcgacaacgaggcgctctacgacatctgcttccgcaccctcaagctcaccaaccct
tcgtttggtgacctgaaccatctgatctcggcgacgatgagcggcgtgacgtgctgcctt
cggttccccgggcagctgaactcggacctccggaagctggccgtgaacctgatcccgttc
ccgcggctgcacttcttcatggtggggttcgcgcccctgacgtcgcgcgggtcgcagcag
taccgcgcgctgacggtgccggagctgacgcagcagatgtgggacgccaagaacatgatg
tgcgcggcggacccgcgtcacgggcgctacctgacggcgtcggccatgttccggggcaag
atgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctac
ttcgtcgagtggatccccaacaacgtcaagtcgagcgtctgtgacatcccgcccgtcggc
ctgtccatggcctccaccttcgtcggcaactccacctccatccaggagatgttccggcgc
gtcagcgagcagttcacggccatgttccgccgcaaggccttcctgcactggtacaccagc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctcgtcgcc
gagtaccagcagtaccaggacgccaccgccgaggagtacgacgacgaggaggtcgacggc
gaagaggaccacgcctga

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