KEGG   Panicum virgatum (switchgrass): 120650164
Entry
120650164         CDS       T07260                                 
Name
(RefSeq) tubulin beta-3 chain-like
  KO
K07375  tubulin beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120650164
  09142 Cell motility
   04814 Motor proteins
    120650164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120650164
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120650164
   04147 Exosome [BR:pvir04147]
    120650164
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120650164
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120650164
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120650164
  Exosomal proteins of colorectal cancer cells
   120650164
  Exosomal proteins of bladder cancer cells
   120650164
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 120650164
NCBI-ProteinID: XP_039783120
LinkDB
Position
9K:complement(13229888..13233784)
AA seq 445 aa
MREILHIQGGQCGNQIGAKFWEVICGEHAVDSTGRYSGSSAQQLERINVYYNEAGGGRYV
PRAVLMDLEPGTMESIRAGPFGGIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDAVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVG
LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEEYDDEEVDGEEDHA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggcggccagtgcggcaaccagatcggcgccaagttc
tgggaggtgatctgcggggagcacgccgtcgactccacgggccgctactcggggtcctcc
gcgcagcagctcgagcggatcaacgtctactacaacgaggccgggggcggccgctacgtg
ccccgcgccgtgctcatggacctcgagcccggcaccatggagtccatccgcgccggcccc
ttcggcggcatcttccgccccgacaacttcgtctacggccagtccggcgccggcaacaac
tgggccaagggccactacaccgagggcgccgagctcatcgacgccgtcctcgacgtcgtg
cgcaaggaggccgagaactgcgactgcctccaagggttccaagtatgccactccctgggt
ggaggcacgggatccggcatgggcaccctgctcatctccaagatccgcgaggagtacccc
gaccgcatgatgctcaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtg
gagccctacaacgcgacgctgtccgtgcaccagctggtggagaacgcggacgagtgcatg
gtcctcgacaacgaggcgctctacgacatctgcttccgcaccctcaagctcaccaaccct
tcgtttggtgacctgaaccatctgatctcggcgacgatgagcggcgtgacgtgctgcctt
cggttccccgggcagctgaactcggacctccggaagctggccgtgaacctgatcccgttc
ccgcggctgcacttcttcatggtggggttcgcgcccctgacgtcgcgcgggtcgcagcag
taccgcgcgctgacggtgccggagctgacgcagcagatgtgggacgccaagaacatgatg
tgcgcggcggacccgcgtcacgggcgctacctgacggcgtcggccatgttccggggcaag
atgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctac
ttcgtcgagtggatccccaacaacgtcaagtcgagcgtctgtgacatcccgcccgtcggc
ctgtccatggcctccaccttcgtcggcaactccacctccatccaggagatgttccggcgc
gtcagcgagcagttcacggccatgttccgccgcaaggccttcctgcactggtacaccagc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctcgtcgcc
gagtaccagcagtaccaggacgccaccgccgaggagtacgacgacgaggaggtcgacggc
gaagaggaccacgcctga

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