Panicum virgatum (switchgrass): 120650206
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Entry
120650206 CDS
T07260
Name
(RefSeq) cysteine protease XCP1-like
KO
K16290
xylem cysteine proteinase [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120650206
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C1: papain family
120650206
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GFIT
Motif
Pfam:
Peptidase_C1
Inhibitor_I29
Motif
Other DBs
NCBI-GeneID:
120650206
NCBI-ProteinID:
XP_039783173
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Position
1K:48871668..48874071
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AA seq
356 aa
AA seq
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MGSKLPVLFLCLAFAACSANQHHDPSVVGYSQEDLALPSKLLDLFTSWSVKHSKIYASPK
EKAKRYRVFKQNLMHIAETNRKNGSYWLGLNQFSDIAHEEFKTNYLGLKPGLPKMGAPSR
PATTFRYADAVNLPWAVDWRYKGAVTPVKNQGKCGSCWAFSTVAAVEGINQIVTGKLVSL
SEQELMDCDTTFDNGCGGGIMDFAFAFIMGNQGIHTEEDYPYLMEEGYCKQKQPHARVVT
ITGYEDVPENSEISLLKALAHQPVSVGIAAGSKDFQFYKGGVFDGACSAELDHALTAVGY
GSSYGQDYIVMKNSWGKNWGEQGFVRIKRGTGKPEGVCGIYAMASYPVKNATHWGA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggatccaagctcccagtgctcttcctatgcctagcatttgcagcctgttctgctaac
cagcaccacgacccctccgttgtcggatactcgcaggaggatcttgcattgccgagcaaa
cttcttgacctcttcacatcctggtcagtcaagcacagcaagatctacgccagcccgaag
gagaaggcgaagaggtatagggtattcaagcagaacctgatgcacattgcagaaacgaac
aggaagaatgggagctactggctgggcctgaaccagttttctgacatcgctcacgaagag
ttcaagaccaattatctgggattgaagccaggattgccaaaaatgggtgcaccatcgcgt
cctgcaacaacattcaggtatgccgatgcggttaacctgccctgggcagtggactggagg
tacaagggagctgtgacaccagtcaagaaccaaggaaaatgcgggagttgctgggccttc
tcgacggtggcagcagttgaagggatcaaccagatcgtgacgggcaagctggtgtcgctc
tcagagcaggagctgatggactgcgacacaacgtttgataatggctgcggaggggggatc
atggacttcgcattcgctttcataatggggaaccagggcatccacactgaggaggattac
ccgtacctcatggaggagggctactgcaaacaaaaacagcctcatgccagagtggtcact
attactggatacgaggatgtcccggagaacagcgagatcagcctgctgaaagcgttggct
catcagcctgtcagtgttgggatagctgctgggagcaaggacttccagttctacaaaggg
ggggtgtttgacggggcctgcagcgccgagcttgaccacgcattgacggccgtcggatac
ggctcatcctacggacaggactacatcgtcatgaagaactcgtggggcaagaactgggga
gagcaagggttcgtcaggataaagaggggcaccgggaaaccggagggcgtctgtggaatc
tacgcgatggcttcctaccctgtcaaaaatgcgacacactggggggcgtaa
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