Panicum virgatum (switchgrass): 120650239
Help
Entry
120650239 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-10-like
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120650239
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120650239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120650239
NCBI-ProteinID:
XP_039783213
LinkDB
All DBs
Position
9K:14026688..14031564
Genome browser
AA seq
346 aa
AA seq
DB search
MMSFKGHEGLGQVAAGSQASHVAAGAPLPWWAGPQLIYGEPAPLSPEETRRDGHFQVVPG
AQGGTPDPAPPAATKRGNPEVLKFSVFQGNLESGGKGDKNPEHSTTIALQSPFPEYNGRF
EIGLGQSMVPSNYSCDDQCYGVLTTYGMRSMSGGRMLLPLNAPADAPIYVNPKQYEGILR
RRRARAKAERENRLAKGRKPYLHESRHLHAMRRARGSGGRFVNTKKEGGASANGASKTVS
AAPAARLATSPSTEPRRVPGLGKGSDGSNPRCQSRSSVSSLSGSEVSSIYDDHASRHQYG
GMEPHLRAPSFFTPLPAIMDGDHGGAAAIPSFKWAASDGCCELLKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttcaagggccacgaggggcttgggcaggtggccgccgggagccaggcctcc
catgttgcggccggagccccactgccgtggtgggcgggcccccagctgatttacggcgag
ccggcacccctgtcgccggaggagacgcgccgggacggccatttccaggtcgtgccgggg
gctcagggcggcacaccggatccggcgccgccggctgccaccaagagagggaaccctgag
gtcctgaaattctctgtgttccaagggaatctggagtcaggtggtaaaggagataaaaac
ccagaacactctaccactattgcgctgcagtcaccatttccagaatacaatggccgtttc
gagatcggtcttggtcaatccatggtcccttccaattattcttgtgatgaccagtgctat
ggtgtgcttaccacttatggaatgagatcaatgtctggtgggagaatgctcttgccactg
aatgccccagccgatgcacccatctacgtgaatccaaagcagtacgaaggtatcctccgt
cgccgccgcgcgcgcgccaaggccgagagggagaacaggctggcgaaaggcagaaagccg
tatcttcacgagtctcgccacctccacgcaatgcgccgggcaagaggctccggcgggcgc
ttcgtcaacacgaagaaagaagggggcgcgagtgcgaacggcgccagcaagacggtgtca
gcggcgccggctgcgcgcctcgccacgtctcccagcaccgagcctcgacgggtgccgggg
ctcggcaagggcagtgacggcagcaacccgcgctgccagtcccggagcagcgtctccagc
ctgtccggctccgaggtgtcgagcatctacgacgaccatgcgagccgccaccagtacggc
ggcatggagccgcacctccgggcgccgtccttcttcaccccgctgccggccatcatggac
ggcgaccacggcggggctgctgccatcccctccttcaagtgggcagccagcgacggctgc
tgcgagctcctcaaggcgtga
DBGET
integrated database retrieval system
