KEGG   Panicum virgatum (switchgrass): 120650277
Entry
120650277         CDS       T07260                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2-like
  KO
K12191  charged multivesicular body protein 2A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120650277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120650277
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120650277
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    120650277
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120650277
  Exosomal proteins of other body fluids (saliva and urine)
   120650277
  Exosomal proteins of colorectal cancer cells
   120650277
SSDB
Motif
Pfam: Snf7 YlqD MerR-DNA-bind Cep57_MT_bd GINT1_N Flagellin_C
Other DBs
NCBI-GeneID: 120650277
NCBI-ProteinID: XP_039783261
LinkDB
Position
9K:14496461..14499957
AA seq 231 aa
MNIFKKKVDPKEALRTSKREMAVATRGVEREIGSLQMEEKKLVAEIKKTAKTGNEAATKI
LARQLVRLRQQILNLQGTRAQIRGVATHTQAMYAGTSISAGMKGASKAMAAMNKQMEPVK
QIKVMKEFQKQSTQLDMTLEMMSDAIDETLDKDEAEEETEELTNQVLDEIGVDVASQLSS
APKGRIGATNKKVDNSQARNAAAPARNVAAPPESSDEVDDLERRLASLRRI
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaacatcttcaagaagaaggtcgaccccaaagaggctctcaggaccagcaaacgtgaa
atggcggtcgccacaaggggagttgagcgagagattggctccctgcaaatggaggagaag
aagctggttgcagagataaaaaagactgccaagaccggaaatgaggcggcaaccaaaata
ttagctcggcaacttgtcaggctgaggcaacaaatcctcaatttgcaaggcacacgggca
cagattcgtggagtagctactcacacacaggcaatgtatgcaggtacctcaatctctgct
ggaatgaaaggtgcaagcaaagcgatggcagcaatgaataagcaaatggagccggtgaaa
cagataaaggtcatgaaagaattccagaagcaatcaactcagttggacatgacgcttgaa
atgatgtccgatgccattgatgaaacactcgacaaagatgaggcggaagaggaaacagaa
gagcttacaaaccaggtccttgacgagatcggtgtcgatgtggcttctcagctttcttca
gctcctaaaggtcgcatcggagcaactaacaagaaagttgacaacagccaagcacgaaat
gctgcggctcctgcaagaaatgtggcagcaccgccagaatcctccgatgaagttgacgat
ctggagcggcgattggcgtctctccgccgcatctga

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