Panicum virgatum (switchgrass): 120650324
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Entry
120650324 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 33-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650324
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120650324
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120650324
NCBI-ProteinID:
XP_039783335
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Position
9K:15173134..15178072
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AA seq
497 aa
AA seq
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MGMGKAVLSKSWQESKLLWHIAFPAILTAVFQFSIGFVTVGFVGHIGSVELAAVTVVENV
IEGFAYGALLGMGSALETLCGQAVGAGQVDMLGVYIQRSWIICGATALVLTPTYLFTGPI
LRALRQPADIAAVAGTYCRWVLPQLFAYAANFPLQKFFQSQSRVWVVTFISGAGLAVHVA
LNYVFVRRLGHGLLAAAVVGNVTWWLIIAAQMGYLLSGCFPEAWRGFSMLAFKNLAAFVK
LSLASAVMLCLELWYYTAVLILVGFLKNAQLQIDVMSICINYQLWTLMVALGFNAAVSVR
VSNELGANRPKAARFAVIMAVLTSGSIGAVFFAVFMAWRTGLPRFFSEDEDVLREAARLG
YLLAGSIFLNSIQPVLSGVAIGAGWQALVAFVNIGSYYVVGIPLAALFGFKLKMDAMGIW
VGMTLGTLLQTAILLFISYRTKWDKQAMRAEERVREWGGRSDALPSATQVAPAIEDPAGR
LSNGFGDLQLQPQQRTG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggggatggggaaggcggtgctgagcaagagctggcaggagtcgaagctgctgtggcac
atcgcgttcccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtg
ggcttcgtggggcacatcggctccgtcgagctcgccgccgtcaccgtcgtcgagaacgtc
atcgagggcttcgcctacggcgccctgctcggcatgggcagcgcgctggagacgctgtgc
gggcaggcggtgggcgccgggcaggtggacatgctgggcgtctacatccagcgctcctgg
atcatctgcggcgccaccgcgctggtcctcaccccgacgtacctcttcacgggccccatc
ctccgcgcgctccgccagcccgccgacatcgccgccgtcgccggcacctactgccgctgg
gtgctcccgcagctcttcgcctacgccgccaacttcccgctccagaagttcttccagtcg
cagagccgggtgtgggtcgtcaccttcatctccggcgccgggctcgccgtccacgtcgcg
ctcaactacgtcttcgtcaggcgcctgggccacggcctactcgccgccgccgtcgtcggg
aacgtcacctggtggctcatcatcgccgcgcagatggggtacctcctctccggctgcttc
ccggaggcgtggcggggcttctccatgctcgcgttcaagaacctcgccgccttcgtcaag
ctgtcgctcgcgtccgccgtcatgctatgcttagagctctggtactacactgcggtgctc
atccttgtgggtttcctgaagaacgcgcagcttcagattgacgtcatgtccatttgcatc
aattaccagctctggaccctgatggttgcgctgggatttaacgcagcagtcagcgtgagg
gtgtcgaacgagctgggcgcgaaccggcccaaggcggccaggttcgcggtgatcatggcg
gtgctgacgtcgggctccatcggcgccgtcttcttcgccgtgttcatggcctggaggacc
gggctgccgcgcttcttcagcgaggacgaagacgtgctgagggaggccgccaggctgggc
tacctcctcgccggctccatcttcctcaacagcatccagcctgtgctctcgggcgtggcg
atcggggcagggtggcaggcgctcgtggcgttcgtcaacatcggcagctactacgtcgtc
ggcatcccgctggccgccctcttcgggttcaagctcaagatggatgcaatggggatttgg
gtgggcatgacactgggcactctgctccagacggccatactcctcttcatttcctacaga
accaagtgggataaacaggcaatgcgggccgaggagagggtaagggagtggggaggaagg
agcgacgccctgccgtcggcgacgcaggttgcgccggcgatcgaagacccggccggtcgg
ttgtcaaatggatttggagacttgcagctgcaaccgcagcaaagaacagggtag
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