Panicum virgatum (switchgrass): 120650330
Help
Entry
120650330 CDS
T07260
Name
(RefSeq) exocyst complex component SEC3A-like
KO
K19983
exocyst complex component 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650330
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120650330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3_C-term
Sec3_CC
Sec3-PIP2_bind
Vps52_CC
Lant_dehydr_C
Motif
Other DBs
NCBI-GeneID:
120650330
NCBI-ProteinID:
XP_039783362
LinkDB
All DBs
Position
9K:15220706..15233000
Genome browser
AA seq
889 aa
AA seq
DB search
MAKSSADDAELRRACAAAVAASGARGEEVAFSIRVAKGRGIFEKLGRLAKPRVLALTVKQ
SSRGEANKAFLRVLKYSSGAVLEPAKLYKLKHLTKVEVISNDPSGCTFVLGFDNLRSQSV
APPQWTMRNIDDRNRLLFCILNMCKEILSYLPKVVGIDIVELALWAKENTLTIDNQVSTQ
DGQETSVATQTERKVTVTVENDLVSQAKEEEEDMEALLDTYVMGIGEADAFSERLKQELV
ALEAANVYQLLESEPLIEEVLQGLDAASATVDDMDEWLRIFNLKLRHMREDIASIESRNN
GLEMQSVNNKALMEELDKLLERLRIPQEFAASLTGGSFEESRMLKNVEACEWLTGAIRSL
EVPNLDPCYVNMRAVREKKAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQ
LKRPDHADLRYKCRTYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRAS
TKAPKNPAVWLEGSNGSGHNGSSADTSTVSDAYSKMLTIFIPLLVDESSFFAHFMCFEVP
ALVPAGSPNVNKSKSGGNDADDDLGLMDPDGNDLKPDSTSAELGTLNEALQELLDGIQED
FYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRKLLDDLESRISVQFSRFIDEA
CHQIERNERNVRQTGILAYIPRFAVLASRMEQYIQGQSRDLIDKAYTKLVSTMFATLEKI
AQSDPKTADIVLIENYAAFQNSLYDLANVVPTLAKFYHQASESYELACTRHISSLIYLQF
ERLFQFNRKVEELTYTIAAEEIPFQLGLSKTDLRRVLKSSLSGIDKSIGAMYRRLQKTLT
SDELFPSLWDKCKKEFLDKYESFVQMVSRIYGNEPIMSVAEMKEILASF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcgagcgcggacgacgcggagctgcggcgcgcgtgcgcggccgccgtggcg
gcgtcgggcgcgcgcggcgaggaggtcgccttctccatccgcgtcgccaagggccgcggc
atcttcgagaagctcggcaggctcgccaagccccgcgtcctcgcgctcaccgttaaacaa
tcttcaagaggcgaggcaaacaaagctttcctccgagtattaaagtattcatctggggca
gtgcttgagccagccaaactttacaaactgaaacatctaacaaaggttgaggttatttcc
aatgatcccagtggttgtacatttgttctgggatttgataatcttaggagtcaaagtgta
gcgccgccacaatggacaatgcgtaatattgatgacagaaatcgtctgcttttctgtatc
ctgaacatgtgcaaggagatacttagttatcttccgaaagttgtcggaattgatattgtg
gagctagctctttgggcaaaggaaaacacattgaccatagataatcaagtgagtacccaa
gatggacaagaaacatcagttgctactcaaaccgagaggaaagtaacagtaaccgttgaa
aatgatctggtgtcccaagcaaaggaggaggaagaagacatggaggcacttcttgacacg
tatgttatgggtataggtgaagcagatgcgttctctgagagattgaagcaggagcttgtg
gctttggaagcagcaaatgtgtatcaattactggaaagtgagcctttaattgaggaggtc
ttgcagggtctggatgctgctagtgccactgtagatgatatggatgagtggctacggatt
ttcaacctgaagcttaggcatatgagagaagatattgcgtcgattgaatcacgtaataac
ggtttggagatgcagtctgtaaataacaaagcacttatggaagagctagataaattgctt
gaacgtctacggattccacaggagtttgcagcatcattaactggaggctcatttgaagag
tcaaggatgctgaaaaatgttgaggcatgtgaatggttgacaggggccatccgcagcctt
gaagttccaaatctggacccatgctatgtcaacatgcgtgctgttagagagaaaaaagca
gaactggagaaactgaaaacaacttttgttcgacgagcatcagagtttttgcggaactac
ttctccagcttggtagacttcatgataagcgacaaaagctacttttcacagcgaggacaa
ttgaagcgtcctgatcacgctgaccttaggtataagtgcaggacatatgcccggcttctg
caacacttaaagagtctggacaagagctgcttaggccccttaaggaaggcatactgtcat
tcccttaatttactactacgtcgagaggcacgtgaatttgccaatgaacttcgtgcaagt
acaaaagcacccaagaatcctgctgtgtggcttgaaggttcaaatggctctggtcacaac
ggaagcagtgctgatacttcaacagtatcggatgcatactcaaagatgctcacaatattt
atcccacttcttgtggatgagagttccttttttgcacattttatgtgctttgaagtacca
gcacttgttccagctggttctcctaatgttaataagagcaaatctggaggaaatgacgca
gatgacgatctaggtcttatggatccagatggcaatgatcttaaacctgatagtacatct
gctgaactgggtacattaaacgaagctcttcaagaactactcgatggaatccaggaagac
ttctacgcagttgtagattgggcatacaaaatcgatcccttgcgctgcatctccatgcat
gggatcacagagcgctacctttctggacagaaagctgatgctgcaggatttgttcgcaaa
ctacttgatgacttggaatcaagaatatcagtacagttcagtcggtttattgatgaagca
tgccatcaaattgagcgcaatgaaagaaatgttcgacaaaccggaattctggcctacatt
ccaagatttgctgtccttgcatcacggatggaacagtatattcaagggcagtccagagat
ttaattgataaagcatacacaaagctagttagcacaatgtttgcaactttggagaaaatt
gcacagagcgatcctaaaactgcagatattgtactgatagagaattatgctgctttccag
aacagtctttatgacttggctaatgttgtgccaactcttgcaaaattctatcatcaagcc
agtgaatcatacgaactagcatgcactcgccatatcagctccctcatctaccttcaattt
gaaagattgtttcagttcaatcgtaaagttgaagaattgacatacaccattgctgctgag
gagatcccatttcagcttgggttatcgaaaactgatctaaggagggttctgaaatccagt
ttatctgggattgacaagtcaattggcgccatgtataggaggttacagaagacactgacc
tctgatgagttgtttccttcgttgtgggacaagtgcaagaaagaatttttggacaagtac
gagagctttgtacagatggtatcacggatctatgggaatgagcccatcatgtcggtcgct
gaaatgaaagagatcctcgctagcttttag
DBGET
integrated database retrieval system
