Panicum virgatum (switchgrass): 120650396
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Entry
120650396 CDS
T07260
Name
(RefSeq) presenilin-like protein At2g29900
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120650396
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120650396
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
120650396
NCBI-ProteinID:
XP_039783445
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Position
9K:complement(16255003..16256966)
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AA seq
456 aa
AA seq
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MAEAAAAVPGDPPAGATVLDSLGEDITRIVYPVSACMLLVVLLVSLLSSPSSPSPLSASI
AAAAGGGGVSGGGDDIPTALFTALTFVVAVTAATFLLALLFYLRCTPCLRAYLGFSALAV
LLVLGGQVALLLLSRLRLPLDAVSFALLLPNAAGALVLAALAPASVPIALHQAALVAVAV
LTAFWFTLLPEWTTWALLVAMAVYDLAAVLLPGGPLKVLLELAIERNEEIPALVYEARPV
DPRHGRNWRLWREGRQPGADLDASSTTVEVIGEVLGRNLDANSGNNSSPQVHEAATSAGN
GNVNNSRPRATLGAALSSDSTVEQAGEVSALREHRVAVAEMRVPLIHRRPERSGEEEEDE
DGIGLSSSGAIKLGLGDFIFYSVLVGRAAMYDYLTVYACYLAIIAGLGITLLLLAFFRKA
LPALPVSIALGVVFYVLTRTLLEEFVVQCSTNLLLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcggcggccgccgtccccggcgaccccccggccggcgccaccgtgctggac
tcgctcggcgaggacatcacccgcatcgtctaccccgtctccgcctgcatgctcctcgtc
gtcctcctcgtctcgctcctctcctcgccctcctccccgtctcccctctccgcctccatc
gccgccgccgccggcggcggcggcgtctccggcgggggggacgacatccccaccgcgctc
ttcacggcgctcaccttcgtcgtcgccgtcacggccgccaccttcctgctcgcgctcctc
ttctacctccgctgcacgccctgcctccgcgcctacctcggcttctccgcgctcgccgtc
ctgctcgtgctcggcggccaggtcgccctgctcctgctctcccgtctccgcctcccgctc
gacgccgtctccttcgcgctcctcctccccaacgcagcgggggcgctcgtgctagccgcg
ctggcgccggcctccgtccccatcgcgctccaccaggccgcgctcgtcgccgtcgccgtc
ctcaccgccttctggttcactctgctccccgagtggaccacctgggcgctgctcgtcgcc
atggccgtctacgacctcgccgccgtgctgctccctggtggtcctttgaaggtgctgctt
gagctcgccattgagaggaacgaggagataccggcgctggtctacgaggcgaggccggtg
gatccccgacacggccgaaattggcgcttgtggagggaagggaggcagcctggcgcggat
ttggatgccagttccaccacggtcgaggtgattggggaggtattggggaggaatcttgac
gccaactctggaaacaattcgtcgccccaagttcatgaagctgccacttcagctggcaat
ggcaacgttaataattcgaggcccagggcgacactgggggctgctttgagctcagattct
acagttgaacaagctggggaggtatccgcattgcgggagcatagagtggctgttgctgaa
atgagggtacctttgatccacagacgcccagagagatctggggaagaggaggaagatgaa
gatggcattgggttgagctcatctggggctatcaagctcgggttgggggacttcatattc
tacagtgttctggtcggtagggcggcgatgtatgactacttgacagtgtatgcctgctac
cttgccatcattgctgggcttggcatcactctcctcctgctggcgttcttccgcaaggcg
ttgcctgccctaccggtgtccatcgcccttggcgttgtgttttatgtgctcacaagaaca
ttgctggaggaatttgttgtgcaatgctccaccaatcttttgctgttctag
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