Panicum virgatum (switchgrass): 120650400
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Entry
120650400 CDS
T07260
Name
(RefSeq) glycerophosphodiester phosphodiesterase GDPD6-like
KO
K01126
glycerophosphoryl diester phosphodiesterase [EC:
3.1.4.46
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120650400
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.46 glycerophosphodiester phosphodiesterase
120650400
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Motif
Pfam:
GDPD
Motif
Other DBs
NCBI-GeneID:
120650400
NCBI-ProteinID:
XP_039783454
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Position
9K:complement(16269033..16272150)
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AA seq
391 aa
AA seq
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MASKWHISIIVLALLFGGSKANPAAPSHSQLDVNHKKPLQTFRPYNIAHRGSNGELPEET
AAAYLRAIEEGADFIETDILASKDGHLICFHDVTLDATTDVVNRTEFAHRKRTYEVQGAK
VTGWFVVDFTLKELKSLRVKQRFSFRDQRYNGKYQIITFEEYILIALYADRIVGIYPEIK
NPVFINQHVKWSNGKKFEDKFVETLLRYGYKGAYMSEDWLRQPLFIQSFAPTSLIYVSNM
TNSPKVLLIDDTNTPTQDTNQSYYEITSNAYLAFIRNYVIGIGPWKDTIVPPKDNYLGQP
TDLVARAHALNLQVHPYTFRNENSYLHFNFHQDPYVEYEYWLNEIGVDGLFTDFTGSLHK
YQEWTKPYPKKQKKAEALLHEIGTMLKNDGY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagtggcacatctctatcattgtcctcgcgctgctttttgggggatccaaa
gccaacccagctgcaccttcccatagccagctggatgtaaaccacaagaagccactacaa
acattcagaccttacaacatcgcccacaggggctcaaatggtgaattaccggaagaaaca
gcagcggcctacctgagagctattgaagagggtgcagacttcatcgaaactgatatactc
gcatcaaaggatggacatctgatctgttttcatgatgtaacattggacgcaacaaccgat
gttgtgaaccggacagagtttgcccacaggaaaagaacttatgaagtccaaggagccaaa
gttactggatggtttgttgtggacttcactcttaaagagcttaaatcgctgagggtgaaa
caacggttcagtttcagggaccaacggtacaatgggaaataccagattattacatttgag
gagtatatcttgattgcgctttatgcggacaggatagtaggaatataccctgagatcaaa
aatccagttttcatcaaccagcatgtcaagtggtcgaatggaaagaaatttgaggataag
tttgtcgagacactactgagatatggatataaaggtgcatatatgtctgaagactggctc
aggcagccactgttcattcaatcctttgctccgacttcactcatttatgtctcaaatatg
acaaactctccaaaagtgttgctaattgatgacacgaatactccaactcaagacaccaat
cagtcatactatgagataacttcaaatgcctatcttgcattcataagaaactatgttatt
ggaattggtccgtggaaggacacaattgttcctccaaaggacaactatttaggacagccg
acagatctcgtcgcacgagcacatgctcttaatcttcaggtgcatccgtacactttcaga
aatgagaattcatacttgcacttcaacttccatcaagacccttatgtcgaatacgaatat
tggctcaatgagatcggtgtcgatgggctgttcactgattttactggtagtttgcacaag
taccaagaatggactaagccatacccgaagaagcagaagaaggcggaagcattgttgcat
gagatcgggaccatgttgaagaatgatggatactga
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