Panicum virgatum (switchgrass): 120650411
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Entry
120650411 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120650411
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120650411
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
MATH_2
BTB
MATH
Motif
Other DBs
NCBI-GeneID:
120650411
NCBI-ProteinID:
XP_039783471
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Position
9K:16465726..16467080
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AA seq
360 aa
AA seq
DB search
MATAASTTTGGGGGLSRSASAIVAVTESGQHQLRIDGYSHTLDVPTGSDIKSPPFRVGGH
SWRVCYYPNGLSSAWSEYISLFLRLDGGVPEGVWARHTFSLLSSEGKPPVPYFTNTGKRI
FTDWGTSALIRRSELESSEHLRGDSFTIRCDVTVTKEIQTRSVDVVVGAGAAPPPPELHR
HLAGLLATGEAADVAFEVDGRTFMAHRCVLMARSPVLHAQLSGGGGGGSTIAVRVEDMEA
QDFEALLRYMYTDSLPEMGGEQGEAAAMLPDLVAAANRYGMERLRLLCEDRLRELVDART
VAAILAFAGEHHCHGLKDACLRFLSDPENLREVVKTNGLEHVSKSCPSVLVDLIAKLAAE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggccgcgtccaccaccaccggcggcggcggcgggctgtcgcggtccgcctcc
gccatcgtcgccgtcaccgagagcgggcagcaccagctgaggatcgacggctactcccac
accctggacgtcccgaccggcagcgacatcaagtcgccgcccttccgcgtcggcggccac
agctggcgcgtctgctactaccccaacggcctcagctcggcgtggtccgagtacatctcc
ctcttcctccggctcgacggcggcgtcccggagggcgtctgggcccggcacacgttcagc
ctgctcagcagcgagggcaagccgccggtgccgtacttcaccaacaccgggaagaggatc
ttcaccgactggggcacctcggccctcatcaggaggagcgagctcgagagctccgagcac
ctccggggcgacagtttcacgataaggtgcgacgtcacggtcacgaaggagatccagacg
aggagcgtcgacgtcgtcgtcggcgccggcgcggccccgccgcctccagagctgcaccgc
catctggccggcctcctcgcgaccggggaggccgcggacgtggcgttcgaggtggacggc
aggactttcatggcgcaccggtgcgtgctcatggctcgatcgccggtgctccacgctcag
ctctccggcggcggcggcggcggctctaccatcgccgtacgggtcgaggacatggaggcg
caggacttcgaggctctgctccgctacatgtacaccgactcgttgccggagatgggcggc
gaacaaggggaagcggcggcgatgctcccggacctggtggcggcggcgaacaggtacggg
atggagaggctgaggctgctctgcgaagaccggctgcgcgagctcgtggatgcgaggacc
gtggcggcgatcctcgccttcgccggcgagcaccattgccacgggctcaaggacgcatgc
ttgcgattcctcagtgatcctgaaaatctaagagaggtcgtcaagaccaacggcctcgag
catgtgagcaagagctgcccctctgttctggtggacctaatcgccaagcttgctgcagag
tag
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