Panicum virgatum (switchgrass): 120650439
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Entry
120650439 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein 5, chloroplastic-like
KO
K08913
light-harvesting complex II chlorophyll a/b binding protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120650439
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120650439
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120650439
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
120650439
NCBI-ProteinID:
XP_039783518
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All DBs
Position
9K:complement(16764226..16765287)
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AA seq
262 aa
AA seq
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MAASALHQTTSFLGQALVPRPAGAGADAGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSE
QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVFHSRWAMLGALGCVFPEILAKNGV
KFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGE
GLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLF
DHVADPVANNAWAYATNFVPGN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcggcgctgcaccagaccaccagcttcctcgggcaggccctggtaccccgc
cccgccggcgccggcgccgacgccggcggccgcatcaccatgcgccgcaccgtgaagagc
gctccccagagcatctggtacgggcccgaccgccccaagtacctgggccccttctccgag
cagacgccgtcgtacctgaccggcgagttccccggcgactacgggtgggacaccgcgggg
ctctccgccgacccggagaccttcgcgcgcaaccgcgagctggaggtgttccactcgcgg
tgggcgatgctgggcgcgctggggtgcgtgttcccggagatcctggccaagaacggcgtc
aagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggtgggctg
gactacctgggcaaccccaacctggtgcacgcgcagagcatcctggccatctgggcttgc
caggtggtgctcatgggcttcgtcgagggctaccgcgtcggcggcgggccgctcggggag
gggctcgacaaggtgtacccgggcggcgccttcgacccgctggggctcgccgacgacccg
gacaccgccgcggagctcaaggtgaaggagctcaagaacggccgcctcgccatgttctcc
atgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctcttc
gaccacgtcgccgaccccgtcgccaacaacgcctgggcctacgccaccaacttcgtcccg
ggcaactga
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