Panicum virgatum (switchgrass): 120650459
Help
Entry
120650459 CDS
T07260
Name
(RefSeq) alpha-soluble NSF attachment protein-like
KO
K15296
alpha-soluble NSF attachment protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650459
Membrane trafficking [BR:
pvir04131
]
SNARE
SNARE associated proteins
Others
120650459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
TPR_12
TPR_2
DHR-2_Lobe_A
ARM_TT21
TPR_1
TPR_MalT
ARM_TT21_4th
UFL1
Foie-gras_1
TPR_8
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
120650459
NCBI-ProteinID:
XP_039783541
LinkDB
All DBs
Position
9K:complement(16939129..16943879)
Genome browser
AA seq
290 aa
AA seq
DB search
MGDNEARGDDFEKKADQKLSGWSFFGNKYEDAADHLDKAGNFFKLAKNWRRAAAVYKRIA
DCHLQGDSKHEAASAYVEAANCYKKFSPQDAAQVLNNAVNLFLEIGRLNMAARYSKDIGE
IYQQEQDLENAAVYLSRAADLFDSEGQSSQANSMTQKIAEIYAQLEKYQKATELFEEIGR
KSINNNLLKYSVRGILLNAGICQLCRGDPVAINNSLERYQDIDPTFSGTREYKLLADLAA
SIDEGDVAKFTDAVKEFDSMTRLDPWKTTLLLKVKNELKKKEEEDEDDLT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaacgaggcgcggggggacgatttcgagaagaaggccgatcagaagctctcg
ggctggagcttcttcggcaacaagtacgaggatgccgccgaccacctcgacaaggccggc
aacttcttcaagctcgccaagaactggagaagagcagctgcagtatacaaaaggattgca
gattgtcatttgcagggagatagcaagcatgaggctgcctctgcttatgttgaggctgca
aactgctacaaaaagttctcaccacaagatgctgcacaagtacttaacaatgccgtcaat
cttttcttggaaattggaagactgaacatggctgcaagatacagcaaggatatcggtgaa
atctatcagcaggaacaagatttagagaatgctgcagtctacctgagtcgggctgctgat
ctttttgacagtgagggacaatcatctcaggcaaatagcatgacacagaaaattgcagaa
atatatgctcagctggaaaagtaccagaaggcaaccgagctctttgaagaaattggtcgt
aaatcaataaacaataaccttctcaagtacagtgtccgaggaattctacttaatgcaggc
atttgccaactatgtagaggtgatcctgttgctataaataattcattggagcgctatcag
gacattgacccaaccttctcagggacgcgcgaatacaagcttttggcggatcttgcagcc
tctatagatgaaggagacgttgccaagtttactgacgccgtaaaggagtttgacagcatg
acacgcctggatccttggaaaacaactctccttctgaaggtaaagaacgagctaaagaaa
aaggaggaagaagacgaggatgatctaacctag
DBGET
integrated database retrieval system
