Panicum virgatum (switchgrass): 120650504
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Entry
120650504 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650504
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120650504
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120650504
NCBI-ProteinID:
XP_039783591
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Position
9K:17562444..17569108
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AA seq
497 aa
AA seq
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MAGGDEAHGGSGGRLESILADASAPAARRAWAAGAIELRLLTRLAAPAVVMYMINYLMSM
STQIFAGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAQKYEMLGIYLQ
RSAVLLCATGVPLAVIYAFSEPILLLLGQSPAIARAAAVFVYGLVPQIFAYAINFPIQKF
MQAQSIVLPGAYISTATLALHVLLSWLVVYKAGLGLLGASLVLSLSWWVIVAAQFAYIVT
SPQCRHTWTGFTCQAFSGLGDFLKLSAASAVMLCLETWYFQVLVLIAGLLPNPELALDAL
SVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKSAHFSVWVVTALSALISIILGIVIL
CLRNYVSYLFTEGEVVSNAVADLCPLLAVTLILNGIQPVLSGVAVGCGWQQFVAYVNIGC
YYIVGVPLGALLGFVFKLGVKGIWGGMIGGTCMQTAILLWVTLRTDWNKEVEEAQKRMNR
WEDKKTEPLLAGVSNGS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggggacgaggcgcacggcgggtccgggggccggctggagagcatcctggcg
gacgcgtcggcgccggcggcgcggcgcgcgtgggcggcgggcgccatcgagctgcgcctg
ctgacgcgcctggcggcgccggcggtggtcatgtacatgatcaactacctcatgtccatg
tccacgcagatcttcgccggccacctcggcaacctcgagctcgccgccgcctccctcggc
aacaccggcatccagatcttcgcctacggcctcatgctgggcatgggcagtgcggtggaa
acgctgtgcgggcaggcctacggcgcccagaagtacgagatgctcggcatctacctgcag
cgctccgccgtgctcctgtgcgccaccggcgtcccgctggccgtcatctacgccttctcc
gagccgatcctgctgctcctgggccagtcgccggcgatcgcccgcgccgccgccgtcttc
gtctacggcctcgtcccgcagatcttcgcctacgccatcaacttccccatccagaagttc
atgcaggcgcagagcatcgtcctcccgggcgcctacatctccaccgccacgctcgcgctg
cacgtgctcctcagctggctcgtcgtctacaaggccggcctcggcctgctgggcgcctcc
ctggtgctcagcctcagctggtgggtcatcgtcgccgcgcagttcgcctacatcgtgacg
agcccccagtgccggcacacgtggacgggcttcacctgccaggccttctccggcctgggg
gacttcctcaagctctccgcggcgtccgccgtgatgctctgcctcgagacctggtacttc
caggtcctcgtgctcatcgccgggctgctccccaacccggagctcgccttggatgcgctc
tctgtgtgcatgactatttcagggtgggtgtttatgatttcggtaggattcaatgccgct
gcaagcgtgagagtgagcaatgagcttggcgccggcaacccaaagtctgcacacttctct
gtgtgggtcgtgacggcgctctctgcactaatcagcatcatccttggcattgtcatcctc
tgcttgcgcaactacgtcagctacttgttcacggagggtgaggtggtctcaaacgcggtg
gcagatctctgcccgctgcttgccgtcacgctcattctcaatggcatccaacctgttctg
tcaggcgtcgctgtcggatgtggatggcaacaattcgtggcctacgtgaacatcggctgt
tactacatagttggcgtgccccttggcgcccttctcgggttcgtcttcaagctcggcgta
aagggtatctggggtggtatgattggaggaacctgcatgcagacggccattttgctgtgg
gtcaccttgagaaccgattggaacaaagaggtagaagaagcacagaaaaggatgaacaga
tgggaggataagaagacggagccccttctcgcgggggtcagcaatggcagttaa
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