Panicum virgatum (switchgrass): 120650506
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Entry
120650506 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650506
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120650506
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120650506
NCBI-ProteinID:
XP_039783592
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Position
9K:17589970..17595246
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AA seq
505 aa
AA seq
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MSGAGEAAGGGSKLQSPLLAAASGPATTSAGGGDGGHGVSRQLEGILRDGSRPWPRRALA
ASAVELRLLTRLAAPAVLVYTVNYLMSMSTQIFSGHLGTLELAAASLGNNGIQIFAYGFT
LGMGSAVETLCGQAYGALKHDMLGIYMQRAAVYASSRPILVLLGESPEIAAAAATFVYGL
IPQIFAYAAIFPIQKFLQAQSIMAPSAYISAATLAAHLALSYLVVYRLGLGLLGASLMLS
ASNWVIAVGQFLYIVTSRRCRLTWTGFSWQAFSSLPEFFKLSAASAVMLCLETWYYQILV
LIAGLLKDPELALASLSVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKSAAFSVVVV
TALSFILSVIISVIILLCRDYISYIFTEGDDVSRAVSRLTPLLAFTLILNGIQPVLSGVA
VGCGWQAFVAYVNVGCYYIVGIPLGCLLGFYFDLGAAGIWSGMIGGTLMQTLILVWVTFR
TNWDKEVEEAMKRLNKWEDSKSPIL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccggcgaggccgcgggcggcggcagcaagctgcagagcccgctgctggcc
gccgcctctgggccggcgaccacctcagctggcggcggcgatggcggccacggggtgagc
cggcagctggagggcatcctgcgcgacgggtcccggccgtggccgcggcgggcgctggcg
gcgtccgcggtggagctgcggctgctgacgcggctggcggcgccggccgtgctggtgtac
acggtgaactacctcatgtccatgtcgacgcagatcttctccggccacctcggcacgctg
gagctcgccgccgcctcgctggggaacaacggcatccagatcttcgcctacggattcact
cttggcatgggtagcgccgtggagactctatgcgggcaggcgtacggcgcgctcaagcac
gacatgctgggcatctacatgcagcgcgccgccgtctacgcctcctcccgcccgatcctc
gtcctcctcggcgagtcgccggagatcgccgccgccgccgccaccttcgtctacggcctc
atccctcagatcttcgcgtacgccgccatcttccccatccagaagttcctgcaggcgcag
agcatcatggctcccagcgcctacatctccgccgccacgctcgccgcccacctggccctc
agctacctcgtcgtctaccggctcggcctggggctcctcggggcctcgctcatgctcagc
gccagcaactgggtcatcgcggtcgggcagttcctgtacatcgtcaccagccggcgatgc
cggctcacctggacggggttctcctggcaggcgttctccagcctgccggagttcttcaag
ctctccgccgcctccgccgtcatgctctgcctcgagacgtggtactaccagatacttgtg
ctcatcgccggcctactcaaggaccccgagcttgcattggcctcgctgtcagtctgcatg
acaatttcagggtgggtgttcatgatctcagttggattcaatgcagcagcaagtgtcaga
gtgagcaacgagcttggtgccggcaacccaaagtcagcagctttctctgtcgtggtggtg
acagcgctgtccttcatcctgtcagtgataatctcggtgatcatcctcctctgccgcgac
tacatcagctacatcttcaccgagggcgatgacgtgtcgcgggcagtgtcccggctgacg
ccgctgctggcgttcactctcatcctcaacggcatccagccggtcctgtcgggggtagct
gtggggtgtggatggcaagccttcgtcgcatatgtcaatgtcggctgctactacattgtt
ggcatcccccttgggtgcctcctggggttctactttgaccttggagcggcgggtatttgg
agtggtatgattggggggaccctgatgcagaccttgatcctggtatgggttacattcagg
accaactgggacaaagaggtggaagaagccatgaaaagattgaataaatgggaagacagt
aagtcccctatattgtga
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