Panicum virgatum (switchgrass): 120650507
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Entry
120650507 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650507
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120650507
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120650507
NCBI-ProteinID:
XP_039783593
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Position
9K:17599777..17604058
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AA seq
505 aa
AA seq
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MAGGESKLVSPLLRGPAAGSRGGEEASGQLEGILGDAALPWRRRMAAATVVEMRLLVRLA
APAVLVYMINYLMSMSTQIFSGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQ
AYGAHKYDMLGVYLQRSTVLLMATGVPLAALYAFSRPILVLLGESPDIAAAAAVFVYGLI
PQIFAYAANFPIQKFMQAQSIMAPSAYISAATLAAHLVLSYLVVYRLGLGLLGASLTLSL
SWWVIVAAQFVYIATSRRCRLTWTGFSWQAFSGLPSFFKLSIASAVMLCLETWYFQILVL
IAGLLKDPELALASLSVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKSAAFSVVVVT
VLSFILSVLISVVILLCRDYISYIFTEGEDVSQAVSQLTPLLALTLILNGIQPVLSGVAV
GCGWQAFVAYVNVGCYYIVGIPLGCLLGFYFDLGAAGIWSGMIGGTLMQTLILVWVTFRT
NWEKEVEEAQKRLNKWEDKTPQLLE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggggagagcaagctggtgagcccgctgctgcggggcccggcggcggggagc
cgcgggggggaggaggcgagcgggcagctggagggcatcctcggcgacgcggcgctgccg
tggcggcggcggatggccgcggcgacggtggtggagatgcgcctgctggtgcgcctggcg
gcgcccgccgtgctcgtctacatgatcaactacctcatgtccatgtccacgcagatcttc
tcgggccacctcggcacgctcgagctcgccgccgcctccctcggcaacaccggcatccag
gtcttcgcctacggcctcatgctggggatggggagcgcggtggagacgctgtgcgggcag
gcgtacggcgcgcacaagtacgacatgctgggcgtgtacctgcagcgctccacggtgctg
ctcatggccacgggggtgccgctcgccgccctctacgccttctcccgcccgatcctcgtc
ctcctcggcgagtccccggacatcgccgccgccgccgccgtcttcgtctacggcctcatc
ccgcagatcttcgcctacgccgccaacttccccatccagaagttcatgcaggcgcagagc
atcatggcgcccagcgcctacatctccgccgccacgctcgccgcccacctcgtcctcagc
tacctcgtcgtctaccgcctcggactgggcctcctcggggcctcgctcacgctcagcctc
agctggtgggtcatcgtcgccgcccagttcgtctacatcgccaccagccggcgatgcagg
ctcacctggacggggttctcctggcaggccttctccggcctccccagcttcttcaagctc
tccatcgcctccgccgtcatgctctgcctcgagacctggtacttccagatactcgtgctc
atcgccggcctcctcaaggaccctgagcttgcactggcctcactctctgtctgcatgacg
atttcagggtgggtcttcatgatctcggttgggttcaatgcagctgccagtgtccgggtg
agcaatgagctcggcgccggcaaccccaagtcggcggcgttctccgtcgtggtggtgacg
gtgctgtccttcatcctgtcggtgctcatctcggtggtcatcctcctgtgccgggactac
atcagctacatcttcaccgagggcgaggacgtgtcgcaggccgtgtcccagctgacgccg
ctgctggcgctcaccctcatcctcaacggcatccagcccgtcctctccggggtggccgtg
ggctgcggatggcaagcgttcgtcgcgtacgtcaatgtcggctgctactacattgtcggc
atccccctcgggtgcctcctcgggttctacttcgacctcggagcggcgggtatttggagc
ggcatgatcgggggcacactgatgcagaccttgatcctggtgtgggtgacattcaggacc
aactgggagaaagaggtggaagaagcgcagaaaagattgaacaagtgggaagataaaact
cctcaattgttggagtaa
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