Panicum virgatum (switchgrass): 120650511
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Entry
120650511 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120650511
KO
K08497
protein transport protein SEC20
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120650511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650511
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
120650511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
120650511
NCBI-ProteinID:
XP_039783598
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Position
9K:17696715..17707582
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AA seq
282 aa
AA seq
DB search
MDEVTQAVENLKKEWSQAVSQLEESIATIKSCGKTGKGTEEANSLPRLNGSAQDALQLLK
SLQFRLDLLAQQLPTFEEVQSGQATLESWDEQYKKLRASLRNANLQAKENIRKAAQEERE
LLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQMMVQEVERSASTLATFDESTSV
LRKAEGEYQGHRSLLMRTRGLLSTMQRQDVLDRVILTAGFIIFSLAVLYVVSRRIGLLTL
QRKLADAVRSGSLSAEDIVAKAQPGPAATNVPAPAPPIYDEL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttacacaagctgttgaaaatctgaagaaagaatggagccaagcggtttca
cagcttgaggagagcattgctacaatcaaatcatgtggaaaaacagggaaagggacagag
gaagcaaattctcttccacggttgaatggttctgcgcaggatgctctgcaattgctcaag
tcactgcagtttcggcttgatcttctagcgcagcagctacctacttttgaagaagtgcag
tctggccaagcaaccttagagtcatgggatgaacaatacaagaagctgcgtgctagtctg
aggaatgctaacttacaagctaaagagaacattagaaaagctgctcaagaggagagggag
cttcttcttgggggtggagaagagtctactatccgcaggcgtaatcttcagacaaaggct
gggatgacatctgctgctgaaagtatcactgagagcctccgacggtctcgccagatgatg
gttcaggaagtggaaagaagtgcaagtaccttggcaacgtttgatgaatcaacaagtgtt
ctccggaaggctgaaggtgaatatcaaggacaccgctctttgctgatgcgtacccgtggt
ttgctctccacgatgcaacggcaagatgttcttgatagggtcatcctgactgccggcttt
atcattttctccttggcggttctctatgttgtttcaagacgtattggtctgttgacgctg
caaaggaagctggctgatgccgtcagatcaggttcattatcagctgaggacatcgtagca
aaagcccagcctggacctgctgcaaccaatgttccagctcccgctcctcccatttatgat
gaactgtga
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