Panicum virgatum (switchgrass): 120650548
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Entry
120650548 CDS
T07260
Name
(RefSeq) actin-2
KO
K10355
actin, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120650548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120650548
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120650548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
120650548
NCBI-ProteinID:
XP_039783646
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Position
9K:complement(18794394..18797785)
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AA seq
377 aa
AA seq
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MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK
SYELPDGQVITIGAERFRCPEVLFQPSFIGMESPGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
REEYEESGPAIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggagaggacattcagccccttgtctgtgacaatggaaccggaatggtcaag
gctggctttgctggagatgatgctccacgtgctgttttcccaagtatagttggtcgtcca
cgccacactggtgtcatggttgggatgggacagaaggatgcctatgttggtgatgaggcc
caatccaagaggggtatcctgactttgaagtaccccatcgagcatggaattgtaagcaac
tgggatgacatggaaaagatctggcaccacaccttctacaatgagctccgtgtagcacca
gaagagcacccagttcttctcactgaggctcctcttaaccctaaggccaacagggaaaag
atgacacagatcatgtttgagaccttcagtgttccagccatgtatgttgctattcaagcc
gtcctttcactatatgctagtggccgtaccactggtatcgtcctggattctggagatggt
gtcagtcacacagtcccaatctacgaaggttatgctctgccgcatgccattctacgtctc
gatcttgctggtagggacctcactgattccctcatgaagatcctgacggagaggggctac
tctttcacaaccactgctgagcgggaaattgtccgtgacatcaaggaaaagcttgcatat
gtcgcacttgactacgagcaagaactcgagactgccaagagcagctcctcagtcgagaag
agctacgagctgcctgatgggcaggtgatcaccattggtgcagagcgcttcaggtgtccc
gaggtcctcttccagccgtcttttatcggcatggaatctcctgggatccacgagacaaca
tacaactccatcatgaagtgcgacgtggatatcaggaaggacctgtacggcaacattgtc
ctcagtggtggatccaccatgttccctggcatcgctgaccgcatgagcaaggagatcacc
gcacttgctccgagcagcatgaagatcaaggtcgttgctccgccggagaggaagtacagt
gtttggatcggaggatcaatccttgcgtctctgagcacattccagcagatgtggatctcg
agggaagagtatgaagaatctggtcctgctattgtccacaggaagtgcttctag
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integrated database retrieval system