Panicum virgatum (switchgrass): 120650561
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Entry
120650561 CDS
T07260
Name
(RefSeq) protein YABBY 3-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120650561
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
120650561
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_12
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
120650561
NCBI-ProteinID:
XP_039783668
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All DBs
Position
9K:18984746..18989191
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AA seq
312 aa
AA seq
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MSSSSSSSSAAAVFPPSPPPLLVENLPPLHQLTPVAAAPPAAEQLCYVHCHFCDTVLVVS
VPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPTTTNTAASATPTEVTSTTTTITTAPP
PPASSANNGQFHFPHPLNLAPNPPHQSLLDEISSANPSLQLLEQHGLGGLIPGGRNAAAP
PPPPPLAAAGNNKGAKQEASPRANPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDIS
HREAFSAAAKNWAHFPHIHFGLMPDHQQGLKKTSLLPQDHHQRKDGLLIKDGLYAAAAAA
AAAAANMGVAPY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcctcgtcgtcgtcctccgccgccgccgtgttccctccctccccgccgccg
ctgctggtggagaacctcccgccgctgcaccagctcacgccggtggccgcggcgccgccg
gccgccgagcagctctgctacgtgcactgccacttctgcgacaccgtcctcgtcgtgagc
gtgccgacgagcagcctgttcaagacggtgacggtgcggtgcggccactgcagcagcctt
ctcaccgtcaacatgagggggctcctcttcccgggcacgccgacgacgacgaacaccgcc
gcctccgccacaccaactgaagtcaccagcactaccaccaccatcaccacggcgccgccg
ccgcccgcctcgtcggccaacaacggccagttccacttcccccacccgctcaacctggca
cccaaccctccccaccaatccctcctggacgagatatcgagcgcgaacccgagcctgcag
ctgctggagcagcacggtctcggcggcctgatccccggcggcaggaacgccgccgcgccg
ccgcccccgccgccgctggccgcggcggggaataataaaggggccaagcaggaggcgtcg
ccgcgcgctaaccccgtcgtcaacagacctccggagaagaggcagcgcgtgccgtcggcg
tacaaccgcttcatcaaggacgaaatccaacgcatcaaggctggcaatcccgacatctcg
cacagggaggccttcagcgcggcggccaagaactgggcgcactttccgcatatccacttt
ggactcatgccggatcaccagcaggggctcaagaagacaagcctgctacctcaggatcat
caccagagaaaggacgggctcctaataaaggacgggctctacgcggcggcagccgctgcc
gcggcggctgcggccaacatgggggttgctccatactaa
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