Panicum virgatum (switchgrass): 120650564
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Entry
120650564 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ 13-like isoform X1
KO
K09531
DnaJ homolog subfamily C member 11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120650564
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120650564
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DnaJ-like_C11_C
DNAJC11_beta-barrel
DnaJ
Laminin_I
Microp_apicomplexa_21
Motif
Other DBs
NCBI-GeneID:
120650564
NCBI-ProteinID:
XP_039783671
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Position
9K:19021276..19027885
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AA seq
541 aa
AA seq
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MASTPEPENGRELYALLHLSPDASDEEIRRAYRQFAQIYHPDKYQDPQMKEVATENFQRI
RDAYEILSDENKRHIYDIYGMEGLNSGLELGPKLTKPEEIREQLERLRRRKEEEKLFVHA
RPNGSIIANFSVPQYLDGDGIMKGMGMSSEVELPVSKQNTVIVGGNLVVNGSAGTGAAST
VLRHQLSSVSHIDFMATAGLRSVIGVQTFRQISPHSTATSGLAVSLRDGSINLSNAWTRR
LSENAVGNIQLVLGDDSSISVGWQKKDEKSTATGEIKFGTNFFGASAHYIHRFSSKSHGR
IAGRVGSTALDFEIGGGRWISEFSTVRMMYNIGIQGVSWRFELHRAGQKLIIPVLLSTDL
NALFVTSAFAIPSTLYFLLQTYVVKPYYLKREKQKTLEKMEGLSTQLTEARKAAKKAQKL
LEPVSNRKKNRQLENNGLVITKALYGNHKKIKESSELNEINDDVASQVFDVTIPLNFLVT
EADQLKQLHEGIKKSGIMGFYDPCPGDPKLLLVEYTFHGRKYKVMVDDYEALLIPQDIHQ
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgccggagccggagaacgggagggagctctacgcgctgctccacctctcg
cccgacgcctccgacgaggaaatccgcagggcgtaccgccagttcgcgcaaatctaccac
cccgacaagtaccaggacccccagatgaaggaagtagcaactgaaaatttccaacgaata
cgcgatgcatatgagatactatccgatgagaacaaaagacatatttatgacatctatggt
atggaaggtttaaattctggcctggaacttggtccgaaactaactaaaccggaggaaatt
agagaacagttggaacgactgcggcggcgcaaggaggaagaaaaacttttcgtgcatgct
cgacccaatggctcaatcattgctaatttctcagtgccacaatatttagatggtgatggc
atcatgaaaggaatgggaatgtctagtgaagttgaattgccagtgtccaagcaaaatact
gtcattgttggtgggaatttggttgtcaatggctcagctggaactggagcagcaagcact
gtgctgcggcaccagttatcttctgtttcccatattgattttatggcaacagctggacta
cgctctgttattggcgtgcagacatttcgtcaaatttcaccacattctacagcaacttct
ggacttgctgtttctttaagagatggatctatcaacctgtcaaatgcttggactcgccga
ctatctgaaaatgctgttgggaatatacagctagtccttggtgatgattcaagtatttct
gttggatggcaaaagaaggatgaaaaaagtactgcaacaggagaaataaagtttggaact
aatttctttggtgcatctgctcattacatccatcgcttctcctccaagtctcatggtcgc
attgccggtagagttggaagcacggcccttgattttgaaattggaggaggaaggtggata
tcagaatttagtactgtaaggatgatgtataacataggaattcagggtgtctcttggaga
tttgagttacatcgtgctggtcaaaagttaattatcccagtcttgctttcgactgattta
aatgcattatttgttaccagtgcatttgctattccttcaacactatattttctgcttcag
acatatgttgtaaagccttactaccttaagcgagaaaagcagaagacacttgaaaagatg
gaaggcttatctacacagctaactgaagccagaaaggcagctaaaaaagctcaaaaattg
ttggaacctgtctccaaccgtaagaagaatagacagctagagaacaatgggttggtgatt
accaaggctctttatggtaatcacaaaaaaatcaaagagagcagtgaattgaatgaaata
aatgatgacgtcgcttcacaagtatttgatgtgaccatcccactgaacttcctcgttacc
gaggctgaccagctcaagcagcttcacgaggggataaagaagtctggaataatgggcttc
tacgatccttgtcctggagatccgaagctgttacttgttgagtacacatttcatggtcgg
aaatacaaggtcatggtggatgactatgaggcgctgttgataccacaagatatccatcaa
ttttga
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