Panicum virgatum (switchgrass): 120650624
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Entry
120650624 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 42-like
KO
K26938
MATE family, citrate exporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650624
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120650624
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GFIT
Motif
Pfam:
MatE
DUF5478
Motif
Other DBs
NCBI-GeneID:
120650624
NCBI-ProteinID:
XP_039783733
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Position
9K:complement(19623486..19630676)
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AA seq
532 aa
AA seq
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MGDDASRGACEESLLDRSAGAAMEEEAGGEHHRHHPLRVFFRDARLAFRWDELGREIMGI
AVPGALALMADPVASLVDTAFIGHIGPVELGAVGVSIAVFNQVSRIAIFPLVSVTTSFVA
EEDAMSNGRDNDKINQENKHAVSDSEMVELISAEEASATTSKSSFETDSCEVSIEQKRKN
IPSVSTALLLGGVLGLLETLLLVLSAKPILGYMGVTPDSAMMKPALQYLVLRSVGAPAVL
LSLAMQGVFRGLKDTKTPLYATVAGDAINIVLDSIFMFVFQYGVKGAAIAHVISQYFIAS
ILLWRLWLHIDLLPPSLNHLQFGRFLKNGFLLLARVIAATCCVTLSASMAARLGSTPMAA
FQICLQTWLACSLLADGLAFAGQAILASAFARKDYPKATATASRVLQLALVLGLLLSLLL
GIGLRIGSRLFTSDQGVLHHIYIGIPFVCLTQPINALAFVFDGINYGASDFGYAAYSMVL
VAIVSIICILTLASYSGFTGIWAALVIYMSLRMFAGFWRIGTARGPWVFLRS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgacgccagccgcggcgcctgcgaggagagcctcctggaccgcagcgccggc
gccgccatggaagaagaagcgggcggcgagcaccaccgccaccacccgctcagggtgttc
ttccgggacgccaggcttgcgttcaggtgggacgagctcgggcgggagatcatggggatc
gcggtgcctggcgcgctcgcgctcatggccgacccagtcgcttccctcgtcgacacggcc
ttcattggccacataggtccagttgaacttggagctgtaggtgtatcaattgctgtgttt
aatcaagtctcaagaattgcaatattcccccttgttagtgtgacaacatcatttgttgct
gaggaggatgctatgtccaatggcagagacaacgacaaaataaatcaagaaaataaacac
gctgtttctgatagtgaaatggtagaactgatttctgctgaagaggctagtgccactacc
agcaaatcatcttttgaaactgactcatgcgaggtcagtattgagcaaaagaggaaaaat
attccatcagtctctacagcactattacttggtggggtgctcggcctacttgaaacccta
cttcttgttctctctgcaaaacctatcttaggttacatgggtgtaacaccggattctgct
atgatgaagcccgcattacaatacttggttctcagatctgttggtgctcctgctgttctt
ttatctttggcaatgcaaggagtctttcgtggacttaaggatacgaagacgcctctatat
gcaactgtggctggagatgctatcaatatagttttggactcaatatttatgtttgtgttc
caatatggtgtcaagggtgctgccattgctcatgttatatcacaatattttattgcatct
atactcttatggagattatggctccatatagatttgttgccacccagcttgaatcacctg
cagtttggtcggtttcttaaaaatggttttttgttacttgcacgagttattgccgccaca
tgttgtgtgacactatctgcatcaatggctgcacgactgggttcaactccaatggctgca
ttccagatctgcttgcagacctggttggcttgttcgcttcttgcagatggattagctttt
gctggtcaggctatacttgcaagtgcatttgctcgtaaggactatccaaaggctactgcc
acagcttctcgtgtcctgcagctggcattggtcttgggacttctcctaagtttacttctt
ggtattggtttgcgtataggatcaaggttatttacgagtgatcagggtgtactgcatcat
atctacataggaataccgtttgtctgtcttactcaaccaatcaacgctttggcttttgta
tttgatggaatcaactatggagcgtcagattttggatatgctgcctactcaatggtcctt
gtcgctattgtcagtatcatttgcatactcactcttgcaagttatagcggctttactgga
atttgggcagctttggtgatctacatgagcctccggatgtttgctggattttggaggata
gggactgcacgaggtccatgggtttttcttcgcagctga
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