Panicum virgatum (switchgrass): 120650652
Help
Entry
120650652 CDS
T07260
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120650652
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120650652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
FYRN
Motif
Other DBs
NCBI-GeneID:
120650652
NCBI-ProteinID:
XP_039783787
LinkDB
All DBs
Position
9K:complement(20059118..20064787)
Genome browser
AA seq
788 aa
AA seq
DB search
MDHDNSRRSHSKRRAHSSFDDGKRKRLNSRHDDTSMSSEPIETIYRILCPVKKIGSVLGK
GGDIVKTLREETKSKIRVADSILGADERVIIIFNYQSHSERADEVAENISSDGLGSMKPH
CPAQDALLKIHDKIVADEFHDGVANKDSESADDVTARILVQGNQVGCLLGKGGSIIQQLR
NDTGAGIRVLPSENLPQCALKSDELVQITGAPSLVRKALYEISTRLHQHPRKENLPLEEI
IDASTQRKRESPPPLPHGNHMFPHLHIDHPPPIPLLDPYRDGPLRTVDETEEFSVRILCA
SELIGSVIGKSGANVKRVEHQTGAHIKVQEVDKDVSEERIIIVSSKEIPADPISPTIEAL
MLLHDKLSALSEKRHVSTRLVVPSSKVGCILGEGGKIITEMRRRTGAEIRVYSKADKPKY
LSFDDELVQVAGPPAVARGALTEIASRLRTRTLRDTNSVNNPPPVAPFHGPPVDLPSREF
PVHGRPANDPPPYGRPAIDPQSGRLTNDPYGRPAIDPPFGRLTNDSPYGRTAIVLPFGRP
TNDPPYGRPANNAPYGQLANDPPYGRPSSNVPYGRLNESAPHDPSYSYPVDYFSKREYPH
GSPPIVSNAPSSAYERYATPARVPIRELPSYSPDADYMSHRSYRAHVPIDSYSSRGTQQL
GITRDGNSNAYDYTEAAGQMHGREDHRGQTSVASRYSSTIELRVPSSSLESIVGVGGVNL
AEIRQISGGKLRLLEGHPGSSESIVEIQGTLDQAKAAQSLLQGLISTNSRSTQQQPQPSR
MPHYPSWG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgataattctagaagaagtcactccaaaaggagggcacattccagttttgat
gatggaaagaggaaacggttaaactccaggcatgatgacacatctatgtcctctgagcca
attgaaaccatttacaggatattgtgcccggtaaaaaagataggcagtgtcttggggaaa
ggtggtgacattgttaagacccttagggaggaaactaaatcaaagataagggttgctgat
tccattcttggtgcagatgagagagtaattatcatcttcaactaccagagtcattccgaa
cgagctgatgaagtagctgaaaatatatctagtgatggcttagggagcatgaagccccat
tgtcctgcccaagatgccttgttgaagatacatgataagattgtggcagatgaatttcat
gatggagttgccaacaaagattctgaaagtgctgatgatgtgactgcccggattttggtt
caaggcaaccaagttggctgccttctaggaaaaggtggctccattatacaacaactgcga
aatgatactggtgctgggatccgtgtcttgccatctgaaaaccttccccaatgtgcactt
aaaagtgatgagctagtgcagataactggagcaccttctcttgtaagaaaagctctgtac
gaaatatcaactcgtctccatcaacatccacgtaaagaaaacctacctcttgaggaaata
atagatgcaagcacacaaaggaaacgcgagtctccaccaccattaccacatggaaaccat
atgttcccacacttgcatattgatcatccaccacctatacccctgcttgatccatataga
gatggaccattgcgaactgttgatgaaactgaggagttttctgtcagaattctgtgtgcc
tctgagctcattggttcagttattgggaaaagcggggctaatgttaagcgggtagagcac
cagactggtgctcacattaaggttcaagaagttgacaaagatgtttctgaagaaaggatt
attattgtttcatctaaggagataccagctgatccaatatccccaacaattgaggcactc
atgttgctacatgataaactaagtgcactctctgagaaacgccatgtgagtacaaggctt
gttgtaccatcaagcaaagttggctgtattcttggggaaggtgggaagataattactgaa
atgagaaggcgaactggggcagaaattcgagtctactcaaaggcagataaaccaaagtac
ttgtcttttgatgacgagcttgtgcaggttgctgggcctccagctgttgcaagaggagcc
ctcacagagattgcttcgagacttagaactaggactttgagagatacaaattctgtcaat
aaccctccacctgtcgccccttttcatggtccgcctgttgatctgcctagcagagaattc
ccagtacatggaaggcccgccaatgatccaccaccatatggaaggcctgccattgatcca
caatctggaagacttaccaacgatccatatggtaggcctgccatagatccaccatttgga
agactaaccaatgattcaccatatggaaggactgccattgttctaccatttggaagacct
accaatgatccaccatatggaaggcctgccaacaatgcaccatatggacaacttgccaac
gatccaccatatggaagaccttccagtaatgtaccatatggaagactgaacgaaagtgca
cctcatgatccttcctattcataccctgtagactacttctctaaaagagaatatccccat
ggaagccctccaattgttagtaatgccccatcatctgcttatgagagatatgcaacacct
gctcgcgttcctattagagaacttccctcttacagtcccgatgcagattatatgtcacat
cgttcttaccgtgcccatgtgcctattgatagctactctagtaggggcacacagcaatta
ggcatcacaagagatggaaattcaaatgcttacgactatactgaggctgctggacagatg
catggacgtgaggatcatcgaggacagacaagtgttgctagcaggtactcgagcactatt
gaactgagggttccaagtagttccttggaatctattgttggagttggcggggtcaatcta
gcagagatccgtcagatttccggtggcaaactgaggctacttgaagggcatcccggttct
tctgagtcaatagtggagatccagggcacactggaccaagcgaaagccgcgcagagtctt
ctgcagggcttgattagcacgaacagccggagcacgcagcagcaaccccagccttcccgc
atgccacattacccaagctggggctag
DBGET
integrated database retrieval system
