Panicum virgatum (switchgrass): 120650677
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Entry
120650677 CDS
T07260
Name
(RefSeq) transcription factor TCP7-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120650677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120650677
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
TCP
120650677
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Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
120650677
NCBI-ProteinID:
XP_039783823
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All DBs
Position
1K:complement(56331759..56333105)
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AA seq
221 aa
AA seq
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MTTRPAAEGGAAAAAADNKQLVPASSGTVRKAPSKDRHSKVDGRGRRIRMPIICAARVFQ
LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTSSPSSLPSSSQTTPTAAAPF
ILGKRARDDAGADAEPTVAAPAPGFWALPGRADLGQLWSFAAAPEMMVATAATPAMAGEA
SAARVGNYLPMAQGNLNLLAYFSGGPAPTATAGRAEEESAR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaggcctgcagcagaggggggcgccgccgccgccgccgccgacaataagcag
ctcgtccccgcctccagcggcaccgtccgcaaggccccctccaaggaccgccacagcaag
gtcgacggccggggccgccgcatccgcatgcccatcatctgcgccgctcgcgtcttccag
ctcacccgcgagctcggccacaagtctgacggccagaccatcgagtggctgctccgccag
gccgagccctccatcatcgccgccaccggcaccggcaccaccccggcctccttctccacc
tcctcgccatcctccctcccctcctcctcccagaccacgccaaccgccgccgcgcccttc
atcctcggcaagcgcgcccgcgacgacgccggcgccgacgccgagcccacggtcgccgcc
cccgccccgggattctgggcgctgccggggcgggcagacttgggccagctctggagcttc
gccgcagcgccggagatgatggtggccacggccgccacgccggccatggcgggggaggcg
tccgcagcccgggtcgggaactacctacccatggcgcagggcaacctcaacctgctcgcc
tacttctccggcgggccagctccaacggccacagccggacgggcggaggaggagagcgca
cgctga
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