KEGG   Panicum virgatum (switchgrass): 120650700
Entry
120650700         CDS       T07260                                 
Name
(RefSeq) thioredoxin-like protein YLS8
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120650700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120650700
Spliceosome [BR:pvir03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    120650700
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_7 DUF3192
Other DBs
NCBI-GeneID: 120650700
NCBI-ProteinID: XP_039783850
LinkDB
Position
9K:complement(20952922..20954823)
AA seq 142 aa
MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtacctgctgccgcacctgcactccgggtgggcggtggaccaggccatcctcgcc
gaggaggagcgcctcgtcatcatccgcttcggccacgactgggacgagacgtgcatgcag
atggatgaagtgctggctgctgttgcagagactataaagaactttgcagttatctacctc
gttgacatcacggaggttcctgacttcaacacgatgtatgagctgtatgatccgtcaacc
gtgatgttcttcttccggaacaagcacatcatgattgatctcgggacaggaaacaacaac
aagatcaactgggccttgaaggacaagcaggagttcatcgacattgtggagactgtgtac
aggggtgcccggaagggccgcggtctggtgattgctccaaaggactactccaccaagtac
cgctactag

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