Panicum virgatum (switchgrass): 120650700
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Entry
120650700 CDS
T07260
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120650700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120650700
Spliceosome [BR:
pvir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120650700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF3192
Motif
Other DBs
NCBI-GeneID:
120650700
NCBI-ProteinID:
XP_039783850
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All DBs
Position
9K:complement(20952922..20954823)
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AA seq
142 aa
AA seq
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MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgctgccgcacctgcactccgggtgggcggtggaccaggccatcctcgcc
gaggaggagcgcctcgtcatcatccgcttcggccacgactgggacgagacgtgcatgcag
atggatgaagtgctggctgctgttgcagagactataaagaactttgcagttatctacctc
gttgacatcacggaggttcctgacttcaacacgatgtatgagctgtatgatccgtcaacc
gtgatgttcttcttccggaacaagcacatcatgattgatctcgggacaggaaacaacaac
aagatcaactgggccttgaaggacaagcaggagttcatcgacattgtggagactgtgtac
aggggtgcccggaagggccgcggtctggtgattgctccaaaggactactccaccaagtac
cgctactag
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integrated database retrieval system