Panicum virgatum (switchgrass): 120650745
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Entry
120650745 CDS
T07260
Name
(RefSeq) replication protein A 32 kDa subunit A-like
KO
K10739
replication factor A2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
pvir03420
Nucleotide excision repair
pvir03430
Mismatch repair
pvir03440
Homologous recombination
pvir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120650745
03420 Nucleotide excision repair
120650745
03430 Mismatch repair
120650745
03440 Homologous recombination
120650745
03460 Fanconi anemia pathway
120650745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120650745
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120650745
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120650745
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120650745
MMR (mismatch excision repair)
120650745
DSBR (double strand breaks repair)
HR (homologous recombination)
120650745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
RMI2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
120650745
NCBI-ProteinID:
XP_039783926
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All DBs
Position
1K:complement(56370788..56373669)
Genome browser
AA seq
273 aa
AA seq
DB search
MSQPDLSPSQFTSSQSQNDAAAPSKMRGASSTMPLTVKQIDDAHQSATGDKGAPFLVDGV
ETANIRLVGMVNGKAERTTDVSFTLDDGTGRLDFIRWVNDASDSSETAAVRNGMYVSVIG
SLKGLQERKRATAFSVGPVTDFNEVTLHFIQCVRMHIENTKSKVGSPARTSSSVGVSASN
VFSESSTPTSLESNPATVTTEANGNDTDLNTQVLNIFREPANIESEHGVHIDEVVKRLKL
PEEKIKEAIDYNVNVGHIYSTIDDFHFKSALTD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacccgacctctccccgtcgcagttcacctcctcccagtcccagaatgacgcc
gccgcaccgtccaagatgcggggcgcatccagcaccatgccgctcaccgtcaagcagatc
gacgacgcgcatcagtctgccaccggcgacaagggcgcccccttcctcgtcgacggcgtc
gagacggctaatattagacttgtggggatggtcaacggcaaggcggagaggaccaccgat
gtgtcattcacgctcgacgacggcactggccgcctcgatttcatcagatgggtgaatgat
gcttccgattcttctgaaactgctgcagttcgaaatggtatgtacgtctctgtcatcggt
agcctcaagggacttcaagagcgaaagcgtgccactgctttctcagtcgggcctgtaact
gacttcaatgaggttacgctgcatttcattcagtgtgttcggatgcatatagagaacact
aaatctaaggttggcagtcccgcacgaaccagttcttcagtgggagtgtcagcctcaaat
gtgttcagtgaatcaagcacaccaacatctttggaatccaatccagcaaccgtgaccact
gaagcaaatggaaatgacactgatttgaacacacaggtgctgaatattttccgtgaacca
gcaaacattgagagtgagcatggggtgcacatcgatgaggtagtcaagcggctcaaactg
ccagaggagaagatcaaggaagctattgattacaatgtgaatgttgggcatatttactca
accattgatgattttcacttcaagtcagctttgaccgactaa
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