Panicum virgatum (switchgrass): 120650799
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Entry
120650799 CDS
T07260
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120650799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120650799
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120650799
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBL_UBAC1
YukD
Motif
Other DBs
NCBI-GeneID:
120650799
NCBI-ProteinID:
XP_039784014
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Position
9K:complement(22403100..22411709)
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AA seq
340 aa
AA seq
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MGSRQEPQPQPHSSYQIYVKMMKTVSLDVEFTDTVDQLKAKIGAIEGIDKGQQELFFAGI
HLKNDNMVTDYGIMDNSFVDLYETDGIQIFVKIPSVGKTIKLNVKKSHSVADIKADIEQK
GGIPRNEQILMHTGRQLEDNMMLAQCGLGNGETLHLLVCPADMLRVFVVVGGGRTINLDV
KCWYTVADVKLMIETFEGLPACTQVLASTESGGDVVALKDTETLQSQNIKNNDVLTLHMG
RTVQFFIKTWEGKTLTMLMELSDTTNDVMKIIEERLQIKPGIYYLRYRGRVLSPGDTLLM
SKIESDSTIGVRLVREVKEKQKGVIELQLETSFGPRVSIK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccgccaggagccccagccccagccccacagcagctaccagatctatgtcaag
atgatgaaaactgtatcgcttgatgttgaattcactgataccgtggatcagttgaaggct
aaaattggtgccattgaggggattgacaagggtcagcaagagctcttttttgctggaatt
cacttgaagaatgacaacatggtcactgattatggcatcatggacaactcttttgttgac
ctctatgaaactgatgggattcaaatatttgtcaagataccctctgttggaaagactatc
aagctcaatgtgaagaaatcccatagtgttgctgatatcaaagctgacatcgaacagaag
ggtgggattcctcggaatgaacagatcctgatgcatacaggccggcagcttgaggataac
atgatgttagctcagtgtggtttgggaaatggagagacacttcatcttttggtctgcccg
gctgacatgctgcgtgtatttgtcgtagttggaggtggaagaactataaatcttgatgtc
aaatgctggtacaccgttgctgatgttaagctgatgattgagacctttgagggtttacct
gcatgtacacaggtgcttgcgagcactgaatctggtggtgatgttgtagcacttaaagac
accgaaacacttcagagtcagaatatcaaaaacaatgatgtgctcacattgcatatgggt
cggactgtccagttcttcatcaagacgtgggaagggaagacgttaactatgttgatggaa
ttgtctgacacgacaaatgatgtcatgaagataattgaagaaaggttgcagattaagcca
ggtatttactatctccggtacaggggacgcgttctatcacctggggatactcttctgatg
tctaagattgagagtgattccactattggtgtccgcctcgttagggaagtaaaagaaaag
cagaagggggtgatagagttgcaacttgaaacttcgtttgggccaagagtcagtattaag
tag
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