Panicum virgatum (switchgrass): 120650804
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Entry
120650804 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120650804
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120650804
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120650804
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
Bac_rhamnosid6H
Motif
Other DBs
NCBI-GeneID:
120650804
NCBI-ProteinID:
XP_039784020
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Position
9K:22548188..22556735
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AA seq
972 aa
AA seq
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MVGGHIFHYRRNSWPAEEYVGRTALQLLDFDGGAPPEQAWRRKLNSHANRLKEFSITFME
AMRMMSLGLRLWSYVREEASHGRKAPIDPFTKERCRPSASQGVPLGGMGSGSISRGFRGE
FKNWHIIPGLCESAPVMENQFSIFVSRDGGNKKYSSVLAPGHHEGLKKKSDSGISSWDWN
LSGQHSTYHALFPRAWTVYDGEPDPDLKISCRQISPFIPHDYKDSSLPTSVFVYTLVNTG
KDRAKVSLLMTWANSIGGFSHNSGGHYNEPFIAEDGVSGVLLHHKTAKDNPPVTFAVAAC
ETQNVNVTVLPVFGLTGENHVSAKEMWNTMVQNGNFNRENFSAGPSMPSSPGQKLCAAVS
ASTWVEPHGRCTVAFALAWSSPKVKFQKGCTYNRRYTQFYGTSERSAVNLVHDALTKYKL
WEEEIEKWQNPILKDERLPEWYKFTLFNELYFLVAGGTVWTDGQPPAINEKASPGSKSSK
RGTKDTKMESVKDSHVNMTAEQVPDSGHMTNGDERSVSKFAAVHGSQMQEQTNGGHNLEE
PIPYLISKDGPENVGKFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELSIQRDFANAV
LYEDQRKVKFLADGASGIRKVKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNPKFVLQI
YRDFAATGDMQFGRDVWPAVCAAMDYMDQFDRDRDGLIENDGFPDQTYDAWTVHGISAYC
GCLWLAALQAAATMAHRLGDRHFAEKYKLKFIKAKAVYEAKLWNGSYFNYDSGTSSNSRS
IQADQLAGQWYTASSGLPPLFDENKIRSALQKIFEFNVMKVKGGRMGAVNGMTPKGKVDE
TCMQSREIWTGVTYAVAANMLLHGMEHQGFTTAEGIFIAGWSEEGYGYWFQTPEGWTTDG
HYRSLVYMRPLAIWAIQYALSPPKAILEAPKVNLMDRIHISPHMARAISEISIRKIAPDN
RCFPSSAFQCEC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgggcacatcttccactaccggaggaactcgtggccggcggaggagtacgtc
ggccggaccgcgctgcagctgttggatttcgatggcggggcgccaccggagcaggcgtgg
cggcggaagctcaacagccacgccaaccggctcaaggagttcagcatcaccttcatggag
gcaatgaggatgatgagccttggcctcagactgtggtcctacgtccgggaggaggcgtcg
catggaaggaaagctccgatcgatccattcacaaaagagcgctgtaggccgtcagcttcg
cagggtgtgccgcttggtgggatggggagcggtagcatttcaaggggtttcaggggagag
ttcaagaattggcacatcatacctggtctttgcgagagtgcaccagtcatggagaaccag
ttctctatatttgtgtctcgagatggggggaataaaaaatactcatccgtgttggctcct
ggacatcatgaaggtttgaagaaaaaaagtgactccggaatttcttcatgggactggaac
ctgagtggtcaacactcgacctatcatgccttgttccctcgggcatggacagtttatgat
ggtgaaccagatccagaccttaaaatatcgtgtcgccagatatcaccgttcattcctcat
gattacaaggatagcagtcttccgacatctgtgtttgtctacacgctggtgaacactggg
aaagatcgtgcaaaagtaagcctgttaatgacatgggcgaactcaattggaggattttca
cataattcaggaggccactacaatgagcccttcattgcggaagacggagtatcgggagtt
cttctgcatcacaaaacagccaaggataatccaccggtcacttttgctgttgctgcctgt
gaaacccagaatgtgaatgtgacagttttgccagtgttcggccttactggagaaaaccat
gtttcagcaaaggaaatgtggaataccatggtacagaacggaaatttcaatcgggaaaat
ttcagtgctggtcccagtatgccttcttctccgggacagaaactctgtgcagctgtctca
gcttcaacttgggtagagccgcatggcagatgtactgttgcatttgctctggcttggtcc
tcacctaaagtaaagtttcagaaggggtgcacttataacaggaggtacacccaattttat
ggaacttctgagagatcagctgttaatttggtacatgatgccttaacaaaatataaactt
tgggaagaagaaattgagaagtggcaaaatcccatactcaaggatgaaagacttccagaa
tggtataagttcactctttttaacgagctttactttctggtagcaggggggacagtttgg
acagatggtcaacccccagcaatcaatgagaaagcaagtcctggttccaagtcctcaaaa
aggggcactaaagataccaagatggaatctgttaaagatagccatgtcaacatgacagca
gagcaagtccctgatagtggtcacatgactaatggtgacgagcgtagtgtatcaaagttt
gcagcagttcatgggtcacaaatgcaagaacaaaccaatggaggacacaatttggaagag
cccattccttacttgatttccaaggatggccctgaaaatgttggcaagttcttgtatcta
gaaggagtggaatacatcatgtggaacacatatgatgtgcatttctatgcatcttttgct
ctcctcgatctattcccaaaaattgagctgagtatccaacgtgattttgccaatgctgtt
ctgtatgaagatcagcgtaaagtcaaatttttggctgatggtgcatcaggaatccgcaag
gttaaaggtgctgttcctcatgaccttggaacacatgatccttggcatgaaatgaatgca
tacaacatacatgatacaagcaaatggaaagatctaaaccccaaatttgtgctccagata
tatagagactttgctgccacaggtgacatgcaatttggtagagatgtctggcctgcagtc
tgcgctgctatggactacatggatcaatttgatcgtgatcgtgatggcctcattgagaat
gatgggttccctgatcaaacctatgatgcatggactgttcatggaatcagtgcttattgt
ggttgtctctggcttgctgcacttcaagctgctgctacaatggcacaccgtcttggggat
cggcactttgctgagaaatacaagctcaagtttataaaagcgaaagcagtatatgaggcg
aagttatggaatggatcatatttcaattacgacagtggcacaagtagcaacagcagatcc
atccaggctgatcagctggcaggccagtggtacactgcctcatcaggattgcccccgctt
tttgacgagaataagataagaagtgctctgcagaaaatatttgaattcaatgtcatgaag
gttaaaggagggcggatgggagccgttaatggtatgactccaaagggaaaggtggatgag
acatgcatgcaatctcgtgaaatctggactggtgttacatatgctgttgctgcaaatatg
ctgctccatggaatggagcatcaaggttttaccaccgcggaaggaatttttattgctgga
tggtctgaagaaggatatggttattggttccagacaccagaaggatggactacagatggg
cattatcggtcgctcgtatacatgcgacctcttgccatttgggcgatccagtatgcactg
tctcctccaaaggcaatccttgaggccccaaaagttaatctaatggatcggatacacata
tccccccacatggctcgagcaattagcgagataagcattagaaaaatagcacccgacaat
agatgtttccctagctctgcctttcagtgtgaatgctga
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