Panicum virgatum (switchgrass): 120650804
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Entry
120650804 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120650804
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120650804
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120650804
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120650804
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Motif
Pfam:
GH116_catalytic
Glyco_hydr_116N
Bac_rhamnosid6H
Motif
Other DBs
NCBI-GeneID:
120650804
NCBI-ProteinID:
XP_039784020
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Position
9K:22548188..22556735
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AA seq
972 aa
AA seq
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MVGGHIFHYRRNSWPAEEYVGRTALQLLDFDGGAPPEQAWRRKLNSHANRLKEFSITFME
AMRMMSLGLRLWSYVREEASHGRKAPIDPFTKERCRPSASQGVPLGGMGSGSISRGFRGE
FKNWHIIPGLCESAPVMENQFSIFVSRDGGNKKYSSVLAPGHHEGLKKKSDSGISSWDWN
LSGQHSTYHALFPRAWTVYDGEPDPDLKISCRQISPFIPHDYKDSSLPTSVFVYTLVNTG
KDRAKVSLLMTWANSIGGFSHNSGGHYNEPFIAEDGVSGVLLHHKTAKDNPPVTFAVAAC
ETQNVNVTVLPVFGLTGENHVSAKEMWNTMVQNGNFNRENFSAGPSMPSSPGQKLCAAVS
ASTWVEPHGRCTVAFALAWSSPKVKFQKGCTYNRRYTQFYGTSERSAVNLVHDALTKYKL
WEEEIEKWQNPILKDERLPEWYKFTLFNELYFLVAGGTVWTDGQPPAINEKASPGSKSSK
RGTKDTKMESVKDSHVNMTAEQVPDSGHMTNGDERSVSKFAAVHGSQMQEQTNGGHNLEE
PIPYLISKDGPENVGKFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELSIQRDFANAV
LYEDQRKVKFLADGASGIRKVKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNPKFVLQI
YRDFAATGDMQFGRDVWPAVCAAMDYMDQFDRDRDGLIENDGFPDQTYDAWTVHGISAYC
GCLWLAALQAAATMAHRLGDRHFAEKYKLKFIKAKAVYEAKLWNGSYFNYDSGTSSNSRS
IQADQLAGQWYTASSGLPPLFDENKIRSALQKIFEFNVMKVKGGRMGAVNGMTPKGKVDE
TCMQSREIWTGVTYAVAANMLLHGMEHQGFTTAEGIFIAGWSEEGYGYWFQTPEGWTTDG
HYRSLVYMRPLAIWAIQYALSPPKAILEAPKVNLMDRIHISPHMARAISEISIRKIAPDN
RCFPSSAFQCEC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgggcacatcttccactaccggaggaactcgtggccggcggaggagtacgtc
ggccggaccgcgctgcagctgttggatttcgatggcggggcgccaccggagcaggcgtgg
cggcggaagctcaacagccacgccaaccggctcaaggagttcagcatcaccttcatggag
gcaatgaggatgatgagccttggcctcagactgtggtcctacgtccgggaggaggcgtcg
catggaaggaaagctccgatcgatccattcacaaaagagcgctgtaggccgtcagcttcg
cagggtgtgccgcttggtgggatggggagcggtagcatttcaaggggtttcaggggagag
ttcaagaattggcacatcatacctggtctttgcgagagtgcaccagtcatggagaaccag
ttctctatatttgtgtctcgagatggggggaataaaaaatactcatccgtgttggctcct
ggacatcatgaaggtttgaagaaaaaaagtgactccggaatttcttcatgggactggaac
ctgagtggtcaacactcgacctatcatgccttgttccctcgggcatggacagtttatgat
ggtgaaccagatccagaccttaaaatatcgtgtcgccagatatcaccgttcattcctcat
gattacaaggatagcagtcttccgacatctgtgtttgtctacacgctggtgaacactggg
aaagatcgtgcaaaagtaagcctgttaatgacatgggcgaactcaattggaggattttca
cataattcaggaggccactacaatgagcccttcattgcggaagacggagtatcgggagtt
cttctgcatcacaaaacagccaaggataatccaccggtcacttttgctgttgctgcctgt
gaaacccagaatgtgaatgtgacagttttgccagtgttcggccttactggagaaaaccat
gtttcagcaaaggaaatgtggaataccatggtacagaacggaaatttcaatcgggaaaat
ttcagtgctggtcccagtatgccttcttctccgggacagaaactctgtgcagctgtctca
gcttcaacttgggtagagccgcatggcagatgtactgttgcatttgctctggcttggtcc
tcacctaaagtaaagtttcagaaggggtgcacttataacaggaggtacacccaattttat
ggaacttctgagagatcagctgttaatttggtacatgatgccttaacaaaatataaactt
tgggaagaagaaattgagaagtggcaaaatcccatactcaaggatgaaagacttccagaa
tggtataagttcactctttttaacgagctttactttctggtagcaggggggacagtttgg
acagatggtcaacccccagcaatcaatgagaaagcaagtcctggttccaagtcctcaaaa
aggggcactaaagataccaagatggaatctgttaaagatagccatgtcaacatgacagca
gagcaagtccctgatagtggtcacatgactaatggtgacgagcgtagtgtatcaaagttt
gcagcagttcatgggtcacaaatgcaagaacaaaccaatggaggacacaatttggaagag
cccattccttacttgatttccaaggatggccctgaaaatgttggcaagttcttgtatcta
gaaggagtggaatacatcatgtggaacacatatgatgtgcatttctatgcatcttttgct
ctcctcgatctattcccaaaaattgagctgagtatccaacgtgattttgccaatgctgtt
ctgtatgaagatcagcgtaaagtcaaatttttggctgatggtgcatcaggaatccgcaag
gttaaaggtgctgttcctcatgaccttggaacacatgatccttggcatgaaatgaatgca
tacaacatacatgatacaagcaaatggaaagatctaaaccccaaatttgtgctccagata
tatagagactttgctgccacaggtgacatgcaatttggtagagatgtctggcctgcagtc
tgcgctgctatggactacatggatcaatttgatcgtgatcgtgatggcctcattgagaat
gatgggttccctgatcaaacctatgatgcatggactgttcatggaatcagtgcttattgt
ggttgtctctggcttgctgcacttcaagctgctgctacaatggcacaccgtcttggggat
cggcactttgctgagaaatacaagctcaagtttataaaagcgaaagcagtatatgaggcg
aagttatggaatggatcatatttcaattacgacagtggcacaagtagcaacagcagatcc
atccaggctgatcagctggcaggccagtggtacactgcctcatcaggattgcccccgctt
tttgacgagaataagataagaagtgctctgcagaaaatatttgaattcaatgtcatgaag
gttaaaggagggcggatgggagccgttaatggtatgactccaaagggaaaggtggatgag
acatgcatgcaatctcgtgaaatctggactggtgttacatatgctgttgctgcaaatatg
ctgctccatggaatggagcatcaaggttttaccaccgcggaaggaatttttattgctgga
tggtctgaagaaggatatggttattggttccagacaccagaaggatggactacagatggg
cattatcggtcgctcgtatacatgcgacctcttgccatttgggcgatccagtatgcactg
tctcctccaaaggcaatccttgaggccccaaaagttaatctaatggatcggatacacata
tccccccacatggctcgagcaattagcgagataagcattagaaaaatagcacccgacaat
agatgtttccctagctctgcctttcagtgtgaatgctga
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