Panicum virgatum (switchgrass): 120650827
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Entry
120650827 CDS
T07260
Name
(RefSeq) cellulose synthase A catalytic subunit 7 [UDP-forming]-like
KO
K10999
cellulose synthase A [EC:
2.4.1.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120650827
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.12 cellulose synthase (UDP-forming)
120650827
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120650827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-UDP
Glyco_trans_2_3
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120650827
NCBI-ProteinID:
XP_039784048
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All DBs
Position
9K:complement(22892698..22896836)
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AA seq
1079 aa
AA seq
DB search
MDAGGLAAGSHMRGELHVVRGRDAEAARSGADVRTCRVCGDEVGAREDGQPFVACAECGF
PVCRPCYEYERSDGTQRCPQCNTRYKRQKGCPRVEGDEDDGPEMDDLEEEFPAAKSPGKK
PHEPVAFDVYSENGEQPPQRWRTGGQTLSSFTGSVAGKDLEAEREMEAGSMEWKDRIDKW
KTKQEKRGKLNHDDSDDDDEKNDDEYMLLAEARQPLWRKVPIPSSQINPYRIVIVLRLVV
LCFFLKFRITTPATDAVPLWLASVVCELWFALSWILDQLPKWAPVTRETYLDRLALRYDR
EGEACRLAPIDFFVSTVDPLKEPPLITANTVLSILAVDYPVDRASCYVSDDGASMLLFDT
LSETAEFARRWVPFCKKFGVEPRAPEFYFSQKMDYLKDKVQPTFVKERRAMKREYEEFKV
RVNALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSQGALDVEGRELPRLVYV
SREKRPGYNHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQL
GRKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGY
DPPRPEKRPKMTCDCWPSWCCCCCCFGGGSKHQRRGKNKGGGADSGADEPRRGLLGFYRK
RGGKKDKLGAKKGGAGLYSKKHQQRAAFELEEIEEGLEGYEELDRSSLMSQKGFEKRFGQ
SPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDIL
TGFKMHCRGWKSVYCTPARPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYG
GRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSI
IATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAA
DETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWV
IVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPKAKGPILKPCGVEC
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggcggcctcgcggcggggtcgcacatgcggggcgagctgcacgtcgtgcgc
ggccgcgacgcggaggccgcccggagcggcgcggacgtgaggacgtgccgcgtgtgcggg
gacgaggtcggggcgcgggaggacgggcagcccttcgtggcgtgcgccgagtgcggcttc
cccgtgtgccggccctgctacgagtacgagcgcagcgacggcacgcagcgctgcccgcag
tgcaacacccgctacaagcgccagaaagggtgcccgagggtggaaggggacgaggacgac
ggcccggagatggacgacctggaggaggagttccccgccgccaagagccccggcaagaag
ccccacgagcccgtcgccttcgacgtctactcggagaacggggagcagccgccgcagagg
tggcggacgggaggccagacgctctcctccttcaccggaagcgtggccggcaaggacctg
gaggccgagagggagatggaagccgggagcatggagtggaaggaccgcatcgacaagtgg
aagaccaagcaggagaagaggggcaagctcaaccacgacgacagcgacgacgacgacgaa
aagaacgacgacgagtacatgctgctggccgaggcccggcagcctctgtggcgcaaggtc
ccgatcccgtcgagccagatcaacccgtaccgcatcgtcatcgtcctccgcctggtggtg
ctgtgcttcttcctcaagttccggatcacgacgccggcgacggacgcggtgccgctgtgg
ctggcgtccgtggtgtgcgagctctggttcgcgctgtcgtggatcctggaccagctcccc
aagtgggcccccgtgacccgcgagacgtacctggaccggctggccctccggtacgaccgc
gagggcgaggcgtgccggctggccccgatcgacttcttcgtgagcacggtggacccgctc
aaggagccccccctgatcaccgccaacaccgtgctctccatcctcgccgtcgactacccc
gtcgaccgcgccagctgctacgtctccgacgacggcgcctccatgctgctcttcgacacg
ctgtcggagacggccgagttcgcgcggcgctgggtgcccttctgcaagaagttcggcgtg
gagccccgcgcgcccgagttctacttctcccagaagatggactacctcaaggacaaggtg
cagccgaccttcgtcaaggagcggcgcgccatgaagcgcgagtacgaggagttcaaggtg
cgcgtcaacgcgctggtggccaaggcgcagaagaagcccgaggaggggtgggtgatgcag
gacggcacgccgtggcccgggaacaacacgcgcgaccacccgggcatgatccaggtgtac
ctgggcagccagggcgcgctcgacgtggagggccgcgagctgccgcggctggtgtacgtg
tcccgggagaagcgccccgggtacaaccaccacaagaaggcgggcgccatgaacgcgctg
gtgcgggtgtcggccgtgctcaccaacgcgcccttcatcctcaacctcgactgcgaccac
tacgtgaacaacagcaaggcggtgcgcgaggccatgtgcttcctcatggacccgcagctg
gggaggaagctctgctacgtccagttcccgcagcgcttcgacggcatcgaccgccacgac
cgctacgccaaccgcaacgtcgtcttcttcgacatcaacatgaaggggctggacggcatc
cagggccccgtctacgtcggcaccggctgcgtcttcaaccgccaggcgctctacggctac
gacccgccgcgcccggagaagaggcccaagatgacgtgcgactgctggccgtcctggtgc
tgctgctgctgctgcttcggcggcggcagcaagcaccagcgccgcggcaagaacaagggc
ggtggcgccgactccggcgccgacgagccgcgccgcggcctgctcggcttctacaggaag
cgcggcggcaagaaggacaagctaggcgccaagaagggcggcgccgggctctacagcaag
aagcaccagcagcgcgccgcgttcgagctggaggagatcgaggagggcctggaggggtac
gaggagctggaccgctcctcgctcatgtcgcagaagggcttcgagaagcgcttcggccag
tcgccggtgttcatcgcctccacgctcgtcgaggacggcgggctcccgcagggcgccgcc
gccgaccccgccgcgctcatcaaggaggccatccacgtcatcagctgcggctacgaggag
aagaccgagtggggcaaggagatcgggtggatctacgggtccgtgacagaggacatcctt
actgggttcaagatgcactgccgcgggtggaagtcggtgtactgcacgccggcgcggccg
gcgttcaagggctcggcgccgatcaacctgtccgaccgtctccaccaggtgctgcgctgg
gcgctgggctccgtggagatcttcatgagccgccactgcccgctctggtacgcctacggc
ggccgcctcaagtggctggagcgcttcgcctacaccaacaccatcgtctaccccttcacc
tccatcccgctcctcgcctactgcaccatccccgccgtctgcctcctcaccggcaagttc
atcatccccacgctgaacaacctggccagcatctggttcatcgcgctgttcctgtccatc
atcgcgacgggcgtgctggagctgaggtggagcggggtgagcatcgaggactggtggcgg
aacgagcagttctgggtcatcggcggcgtctcggcgcacctcttcgccgtgttccagggc
ctgctcaaggtgctgggcggcgtggacaccaacttcaccgtcacctccaaggcggccgcc
gacgagacggacgccttcggcgagctctacctcttcaagtggaccaccctgctggtgccc
cccaccacgctcatcatcatcaacatggtcggcatcgtcgccggcgtctccgacgccgtc
aacaacggctacggctcctggggcccgctcttcggcaagctcttcttctccttctgggtc
atcgtccacctctaccccttcctcaaggggctcatggggaggcagaaccggacgcccacc
atcgtcgtgctctggtccatcctcctcgcctccatcttctcgctcgtctgggttaggatc
gaccccttcatccccaaggccaagggccccatcctcaagccgtgcggagtcgagtgctga
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