Panicum virgatum (switchgrass): 120650828
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Entry
120650828 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03259
translation initiation factor 4E
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120650828
03012 Translation factors [BR:
pvir03012
]
120650828
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120650828
mRNA cycle factors
Common to processing body (P body) and stress granule
120650828
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-4
120650828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
NCBI-GeneID:
120650828
NCBI-ProteinID:
XP_039784049
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Position
9K:complement(22897659..22901606)
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AA seq
209 aa
AA seq
DB search
MAEVDTAPAAVAATTPEVAATEGGAAAEAKGPHKLHRQWTFWYDIQSKPKPGAAWGTSLK
KAYTFDTVEEFWSLYDQIFRPSKLIGNADFHLFKAGVEPKWEDPECANGGKWTVPCNRKA
TFETMWLETLMALIGEQFDETEDICGIVASARQRGDKLALWTKTASNEAVQVNIGKKWKD
VIDYNDKITYTFHDDSRREKPSRGGRYTV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggttgacaccgcgccggcggctgttgcggcgacgaccccggaggtcgcggcg
accgagggcggcgccgctgcggaggccaaggggccgcacaagctgcaccggcagtggacg
ttctggtacgacatccagtcgaagcccaagcccggcgctgcgtggggcacctccctcaaa
aaggcctacaccttcgacaccgtcgaggagttctggagcttgtacgaccagattttccgt
ccaagcaagttgattgggaatgctgattttcatctgttcaaggctggagtggagccaaaa
tgggaagacccagagtgtgcaaatggtggcaaatggactgtcccatgcaacagaaaggca
acctttgagaccatgtggcttgaaacgttgatggctcttattggagagcagtttgatgaa
actgaggacatctgtggaattgttgctagtgcccgtcagagaggagataaactcgcatta
tggactaagactgccagcaatgaagctgtccaggtaaacattggcaagaaatggaaggat
gttatcgactacaatgacaagatcacctacactttccatgatgactccagaagagagaag
ccgagcagaggtggacggtacaccgtgtaa
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