Panicum virgatum (switchgrass): 120650845
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Entry
120650845 CDS
T07260
Name
(RefSeq) ABC transporter G family member 51-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120650845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120650845
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120650845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
ABC_trans_N
AAA_25
RsgA_GTPase
AAA_28
AAA_33
AAA_23
SMC_N
Rad54_N
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
120650845
NCBI-ProteinID:
XP_039784065
LinkDB
All DBs
Position
9K:complement(23200402..23214637)
Genome browser
AA seq
1486 aa
AA seq
DB search
MRRDGTGRNPIYPARTVARPFRIPLHRNQNPTHFSRSRRRRRRAMSFAARGVQHHVAVDV
EAGDEERRRAREEDEANLLWAAIEERPFAKRRNLAIVLPDPDSAGARTSGGGGAGEGKVV
DVRRLDRPGVQRVLRRALATADLDNANLLHGIKARFDAVGLEVPQVEVRFRNLTVSTEVH
VGRRALPTLVNYVHDVAERLLISCHLLRPKKRKLTILDDVSGIVRPGRMTLLLGPPSSGK
STLLLALAGKLDPQLKKNGEVIYNGISLMEFCVQRTSAYISQTDNHIGELTVRETLDFAA
RCQGASENWQECLKDLLDLENKRGIRPSPEIDAFMKTASVGGQKHNLVTDYVLRVLGLDV
CAGTPVGTDMARGVSGGQKKRVTTGEMVVGPRKTLLMDEISTGLDSSTTFQIVKCMRNFV
HEMEATVLMSLLQPAPETFDLFDDLILLSEGQIIYQGPIVHVVDYFKSLGFSLPPRKGIA
DFLQEVTSRKDQAQYWSDKSKQYTFISASTMASAFKQSQYGRSLVSTLSDPYVGTNSPQA
LARSKFAVSKLSLVKACFARELILISRNRFLYTFRTCQVAFVGVITCTIFLRTRLHPVDE
QNGNLYLSCLFYGLVHMMFNGFTELPITISRLPVFYKHRDNYFHPAWAFSIPNWILRIPY
SLIEAVVWSCVVYYTVGFAPTADRFFRFMLLLFSVHQMALGLFRMMGAVARDMTIANTFG
SAALLAIFLLGGFIVPKEAIKPWWQWAYWVSPLMYGQRAISVNEFSASRWSKVSVAGSNS
TVGTNVLISHNLPTQDYWYWIGVGALLAYAVLFNGLFTLALAFLNPLRKAQATMPSDSEE
IDDAGIDNLSNGQVIIENNGRNYEFKGQTEGELNKGMILPFLPLTMTFHNVNYFVDMPKE
IQARGVAEKRLQLLSQVSGVFRPSVLTALVGSSGAGKTTLLDVLAGRKTGGYIEGDIRIS
GHKKEQRTFARVAGYVEQNDIHSPQVTVEESLWFSSILRLPKDISRETRHEFVEEVMALV
ELDQLRHALVGRQGSTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV
RNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYGGSLGVNSIDMIGYFQSIPGV
RRIPEGYNPATWMLEVSTQACEESLGLDFTTLYKNSDQFRNVEGIIEALSAPADGMKPLE
FSSEFSQNFLMQFKACLRKQSLIYWRSPEYNVVRLFFTTIAAVIFGSIFWNVGMKRGTTE
DLMLVMGALYAACLFLGVNNASSVQPVVSTEMIVYYRERAARMYSSFPYAAAQGLVEIPY
IAVQTLIFGLITYFMINYERNIGKLLLYLVFMFLTFTYFTFYGMVAVGLTPTQQMAAVVS
SAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGIITSQLGDVQTRIVGPGFDGT
VQEFLEESLGFKQGTAGVTVAVLACFSLFFFAIYATSIKVINFQRR
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgggatggaaccggtcgaaacccgatataccccgctcgcacagtcgcacgaccc
ttccgtattcctctccaccgaaaccaaaaccccacacacttctctagatcgcggcggcga
cggcggcgggcgatgtcatttgcggcgagaggcgtccagcaccacgtggcggtggatgtg
gaggccggggacgaggagaggaggagagcgcgggaggaggacgaggccaacctgctctgg
gcggccatcgaggagcgtcccttcgccaagcggcgcaacctcgccatcgtcctccccgac
cctgacagcgccggcgcccgcaccagcggaggaggcggtgcgggagagggcaaggtggtg
gacgttcggaggctcgaccggcctggggtccaacgcgtgctccgcagggctcttgccacc
gccgatctcgacaacgccaacctcctccacggcatcaaggcccgcttcgacgcggtgggc
ttggaggtgccgcaggtggaggtgaggttccgcaacctcactgtatccacggaggtccac
gtcggcagacgggcgttgccaacgctcgtcaactacgtccacgatgttgccgagagactt
ctaatctcctgccaccttttacgtcctaaaaagcgcaagctcactattttggatgatgtt
agcggcattgtcagacctgggagaatgacattattgctgggaccaccttcatctgggaaa
tcaacgctcttgttggctctagccggtaaactggatcctcagctaaagaaaaatggagaa
gtgatctacaatggaatttctctcatggaattttgtgtacaacgaacttctgcttatatt
agtcagacagacaatcatattggagagttgacagtgagagaaactttagactttgctgca
agatgccagggtgcaagtgaaaactggcaagagtgcttgaaggatctactagatcttgaa
aacaagagaggcataagaccgtctccagaaatagatgcctttatgaagacagcatctgtt
ggaggacaaaaacacaatcttgttacagactatgtgctgagagtgcttggattggatgtg
tgtgctggtactcctgttggtactgacatggcaagaggtgtctctggtggtcagaaaaaa
cgagtcactacgggtgaaatggttgttggacctagaaaaacccttctcatggatgaaata
tcaacaggtcttgacagctcaacaacttttcaaatagttaagtgcatgaggaactttgtt
catgagatggaggctactgtgcttatgtcacttcttcagcctgcaccagagacatttgat
ctattcgatgatctaattcttctctcagaagggcagatcatttatcaaggccccattgtg
catgttgtggactatttcaaatcattaggattttctctgcctcctcgtaagggaattgca
gatttcctccaagaggtgacatcaaggaaagaccaagctcagtactggtctgacaagtca
aaacagtatacttttatttctgcgtcgacaatggcttctgcatttaagcaatcccagtat
ggcagatctctggtttcgactttaagcgatccatatgttggcacaaattctcctcaggcg
cttgccagatcaaagtttgcagtatcaaagcttagccttgttaaagcatgctttgccagg
gagcttattttaataagtcgcaaccgttttctctacactttcaggacatgccaagttgct
tttgtcggtgtaatcacatgcacaatatttcttcgtacaagattacaccctgttgatgag
caaaatgggaatctttatctgtcttgtctgttttatggacttgttcatatgatgttcaat
ggttttactgagctgcccattactatttcacggcttccagtgttctataagcacagagac
aattactttcatcctgcatgggctttctcaatccccaattggatactaagaattccgtat
tctcttattgaagcggtagtttggtcatgtgttgtttactacacagtaggctttgcgcct
actgctgatagattctttcgctttatgctattgttgttctctgtacatcaaatggctctg
ggccttttccggatgatgggagctgtagcacgagacatgactattgctaatacttttgga
tcggctgccttattggcaatttttctcttaggagggtttattgttcctaaagaggctata
aaaccatggtggcagtgggcttattgggtttcccccttaatgtatggacaacgtgctatt
tcagttaatgaattctcagcatccagatggtcaaaggtatcagttgctggcagcaatagt
acagttggaacgaatgttcttatttcacacaatctccctacacaagattattggtactgg
attggagttggtgctttattggcttatgccgtcttgttcaatggtctatttactcttgct
ttggcattccttaatcctctacggaaggcccaagcgacgatgccatctgattctgaggaa
atagatgatgcaggaattgataatctatccaatggacaagttattatagaaaataatggc
agaaattatgagtttaaaggacagactgaaggagaacttaacaagggaatgatactacca
tttctacctctaacaatgacatttcacaatgtgaactattttgttgatatgcccaaggaa
atacaagcaaggggtgtagccgagaaaagactacagttgctgtctcaagtaagcggggta
tttaggcccagtgtcctaacagcactggtcggctcaagtggtgctggaaagacaaccctt
cttgatgttttagctggcagaaaaacaggcggatatatcgaaggtgatatcaggatctct
ggacataagaaagaacaaagaacctttgccagggtagcaggatatgttgagcaaaatgat
atccactcaccacaagtgacagttgaagagtccttgtggttttcgtcaatcttacggctt
ccaaaagatataagtagagaaacaagacatgaatttgtcgaggaagttatggctttggta
gagcttgatcaactgagacatgcattagtagggagacagggttctactggattgtcaaca
gagcaaaggaaacgccttacaatagctgttgaactagttgcaaatccatcaattattttc
atggatgaacctacttctggtttggatgcaagagcagctgccattgtgatgcgtactgtc
cgaaatactgttgatactgggagaactgtagtttgcactatacaccagcccagtattgat
atctttgaagcctttgatgagctcctcctcctgaaacgtggaggccgtgttatatatggt
ggttctctgggtgtcaactcaattgacatgattggttattttcagtctattcccggggtt
cgtcgtatccctgaaggctacaatccagcaacctggatgcttgaggtcagcacacaggca
tgtgaagagagccttgggttagattttacaacattgtacaagaactcagatcagttcagg
aatgtggaagggataattgaagcattaagtgctccagctgatggcatgaagcctttggaa
ttctcatcggagttttcacagaactttctaatgcagttcaaagcatgcttgcgtaagcaa
agccttatttactggagaagtccagagtacaatgttgtgcgattatttttcacaaccatt
gctgctgtcatattcggatcaatattttggaacgttggaatgaaaagaggaacaacagaa
gatttgatgcttgtaatgggagctctttatgcggcatgcctttttcttggtgtaaataat
gcatcatctgtgcagcctgtggtgtccactgagatgatagtctactacagggaacgggct
gctagaatgtactcatcgttcccatacgcagctgcacagggtcttgtagagattccttac
attgcagttcagacacttatatttggcctcatcacttacttcatgatcaattatgagagg
aacataggaaaattgcttttatatcttgttttcatgttccttactttcacctactttaca
ttctacggaatggtggcagtagggttgaccccaacccaacaaatggcagcagtagtatcg
tcagcattttactccttgtggaatcttctttctgggttcctcatcccccaatctagaatc
ccaggttggtggatctggttctattacatctgcccagttgcatggaccctgcgaggtatt
attacatcgcagttgggcgatgtgcaaacaaggatagttggccctggtttcgatgggacc
gtgcaggaattcttggaggaaagcttgggattcaaacaggggacggctggtgtcacagtt
gcagtgcttgcttgcttctcccttttcttctttgccatatatgcgacttccatcaaggtt
ataaacttccagagaagataa
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integrated database retrieval system
