Panicum virgatum (switchgrass): 120650871
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Entry
120650871 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA thiolase 2, peroxisomal-like
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00280
Valine, leucine and isoleucine degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120650871
00592 alpha-Linolenic acid metabolism
120650871
01040 Biosynthesis of unsaturated fatty acids
120650871
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120650871
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120650871
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
120650871
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Motif
Pfam:
Thiolase_N
Thiolase_C
Thiolase_C_1
ACP_syn_III_C
ketoacyl-synt
Motif
Other DBs
NCBI-GeneID:
120650871
NCBI-ProteinID:
XP_039784100
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Position
9K:complement(23712567..23716443)
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AA seq
462 aa
AA seq
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MEKAIDRQRVLLRHLDPAAAASGPSPPAISASACSAGDSAAYHRRAAFADDVVIVAAYRT
AICKAKRGGFKDTFAEDLLVPVFKALLDKTKLNSSEVGDIVVGTVLAPGSQRAIECRMAA
LYAGIPDTVPLKTVNRQCSSGLQAVADVAAAIKAGLYDTGIAAGLESMTLNRVTLDGQVN
PKVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVP
VHTKIVDPKTGEEKEIVVSADDGIRAGTSLAVLSKLKPAFSKDGSTTAGNASQVSDGAGA
VLLMRRDVAMKKGLPIIGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLQIDDIDLFEI
NEAFASQYVYCCKKLELDPTKVNVNGGAIALGHPLGATGARCVSTLLNEMKRRGKDCRFG
VISMCIGSGMGAAAVFERGDGVDELTNARGIPSHNWLSKDAM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggccatcgacaggcagcgggtcctgctgcggcacctcgaccccgcggccgcg
gcgtcgggcccctccccgcccgccatctccgcgagcgcgtgctcggcgggggacagcgcg
gcgtaccaccggagggcggccttcgccgacgacgtcgtcattgtcgctgcatacaggacg
gcgatttgcaaggccaagagagggggtttcaaggatacgttcgctgaggacctattggtt
cctgtcttcaaggctttattggataaaacaaagctgaactctagcgaagttggggacatt
gttgtcggtactgtcttagcacctgggtcccagagggcaatcgaatgcagaatggcagca
ctctatgctggtattcctgacactgttcctctgaagactgtaaacaggcaatgctcttct
ggccttcaggcagttgcagatgttgctgctgctattaaagcagggctgtatgataccggt
attgctgctggcctcgagtccatgacattgaaccgagttactcttgatggtcaagtgaat
cccaaagttgagctattttctcaagcacgtgattgccttctcccaatgggcctcacatca
gagaatgttgcacaccggttcggcataacacgactggaacaagatcaagctgctgttgag
tctcacagaaaggctgctgcagcagcagctgctggtaaattcaaggaagaaattgtgcct
gttcatacaaagattgtcgatccaaaaactggtgaggaaaaggagatcgtagtctcagca
gatgatggaatcagagctggtacttcgctggcagtcctgtcaaaactcaaaccagcattt
tcaaaggatggcagtactactgctgggaatgctagccaagtgagtgatggtgctggggct
gtcttgctaatgagacgggatgtcgctatgaaaaaaggtcttccgattattggcgtcttt
aggagctttgcggcagttggagttgatccagctgtaatgggtattgggccggctgttgca
atccctgcagctgtgaaagctgccggactacaaattgatgatattgacctttttgaaatt
aatgaggcttttgcatctcagtatgtgtactgctgcaaaaagttggaacttgatcctaca
aaagtcaacgttaatggaggtgcaattgctcttgggcatccattgggtgctacaggtgct
cgatgtgtcagtactcttctcaatgagatgaaacgccgtggcaaggattgccgtttcgga
gtgatttctatgtgcataggttctgggatgggtgctgctgctgtattcgagcggggagat
ggtgtggatgagctcaccaatgctcgggggatcccgtcccataactggctttccaaggat
gccatgtaa
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