Panicum virgatum (switchgrass): 120650945
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Entry
120650945 CDS
T07260
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120650945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120650945
03036 Chromosome and associated proteins [BR:
pvir03036
]
120650945
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
120650945
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120650945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
120650945
NCBI-ProteinID:
XP_039784190
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Position
9K:24988922..24994582
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AA seq
335 aa
AA seq
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MVSGGPATSASTGAGGGSPSDRGGPAPSASASVSTPASESTVARRLNGLDLQADDAPSSQ
PAVSKKKKRGVRAVGPDKNGRGLRQFSMRVCEKVETKGRTTYNEVADELVAEFSDPNINI
DSPDPDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWRGLPKTSMNDIEELKT
EIVGLKGRVDKKSAYLQDLQDQYVSLQNLVQRNEQLYGSGDAPSGGVALPFILVQTRPHA
TVEVEISEDMQLVHFDFNSTPFELQDDSFVLKAMGLSGKEETDGTQTPVANGGECSSTPN
NYWHQLPQPARPRGVRLANSPPIPGILKGRVKHEH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgggccggccacttccgcgtccaccggcgccgggggcggctccccctcc
gacaggggcggccccgcgccgtcggcctctgcctcggtctccacgccggccagcgagagc
accgtggcccgccgcctcaacggactcgacctccaggccgacgacgcgccatcgtcgcag
ccagccgtgagcaagaagaaaaagagaggggtgcgtgctgttggtcctgacaaaaatggc
cgtggattgcgccaattcagcatgagagtctgtgagaaagttgaaaccaaagggagaaca
acctacaatgaggttgctgatgaactggtcgctgagttttcagaccccaacattaatatt
gactctccagatcctgataatccctccgcacaacaatatgatgaaaagaatatccgacga
agagtttatgatgcgctgaatgtcctaatggctatggagattatatctaaagataaaaag
gagatacagtggagaggcttgcccaagacaagtatgaatgatattgaagaattgaagaca
gagatcgttggactgaaaggtcgggttgacaagaaaagtgcatatttgcaggatttacaa
gatcaatatgtaagcctccaaaacttggtacaacgaaatgagcagctatatgggtcagga
gatgcaccttctggtggagtggccttgccatttatactagttcagacacgtcctcatgca
actgtagaagtggagatatcagaagatatgcagttggtgcattttgacttcaatagcaca
ccatttgagttgcaggatgattcctttgtactgaaagcaatggggttatctggcaaagaa
gaaaccgatggcacccaaacccctgttgccaatggaggtgagtgctcaagtacaccaaac
aattattggcatcaattgccacagcctgcgaggccaagaggtgttaggctagcgaactcg
cctcctattccagggatactaaaagggcgcgtcaagcatgaacactag
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