Panicum virgatum (switchgrass): 120650959
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Entry
120650959 CDS
T07260
Name
(RefSeq) gem-associated protein 2-like
KO
K13130
gem associated protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120650959
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
120650959
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GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
120650959
NCBI-ProteinID:
XP_039784207
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Position
9K:25316124..25320134
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AA seq
378 aa
AA seq
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MAATAAATAPEGSARRRAAYARPELEALRGAPSEEAQARLWTEVRAALVAAGCSGEYDGL
LAAEDEEPRSRRGSKGRKAAGGGGAGAGRKWGEEAAAAPPFSGVPDIGAWRNGDLGVSHE
HCLEAGARGPVVAYGVVEEQGEDVEYEDDSDDDYEGILKPAFAVDGDPDFESGEPFDGFE
YLRRVRWEARQIPRVKVAKVDLSAARKEQTPYMPEIPDIPKYSPDLRASKQWEDAFLTHF
SETRLVFSEHVSSDEPSVSGGMKNYTKPVSSTEPQIDPTLTMLCNMDAVAIAATLRNYID
MIQSLDSLSRNNCLWLFALCVAVDAPLDAETCASLRSLLRKCATILATKSEMDDEVVMLN
ILMAISGRYFGQYEHRCE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccgccgccgccacggcccccgagggatccgcgcgcaggagggcggcgtac
gcgaggccggagctcgaggcgctcaggggcgccccgtcggaggaggcgcaggcgcggctg
tggaccgaggtccgcgccgccctcgtcgccgccggctgctccggcgagtacgacgggctc
ctcgcggctgaagacgaggagcctaggagcaggagggggagcaaggggaggaaggcagcg
ggcgggggaggcgctggggccgggaggaagtggggcgaagaggcggcggcggcgcccccg
ttttctggtgtgcccgatattggtgcgtggagaaacggggatttgggggtttctcacgaa
cactgcttggaggctggtgctcgtggccctgttgtggcttatggagtggttgaagagcag
ggtgaagatgtggagtatgaagatgacagcgatgatgactatgagggcattttgaagcct
gcatttgcggtggacggggaccccgatttcgagtctggagagccttttgacggttttgag
tatcttcggcgtgtcaggtgggaggctaggcaaatccctagagtgaaggtagccaaggtg
gatttgagtgcagctagaaaggagcaaacgccttatatgccagaaattcctgacataccc
aagtactcacctgatttgcgcgcatcaaagcaatgggaggatgcatttcttacccatttt
tctgagaccaggctggtgttctccgagcatgtcagctctgacgaaccatctgtatctggt
ggaatgaaaaactacacaaaacctgtaagcagcacggaaccacagattgacccaacactg
acaatgctttgcaacatggatgcagttgcgatagctgcgacgctaaggaactacatagat
atgatccagagtttggactcactctcaaggaataactgcctatggctctttgcactctgt
gtagccgtagatgctcccttggatgcagagacatgtgcctccctaaggtccttgctgcgc
aagtgcgcaaccatccttgccacaaagtcagagatggacgacgaggttgtaatgctgaat
atactgatggcaatatctggaaggtattttggacagtatgaacatagatgtgagtag
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