Panicum virgatum (switchgrass): 120650963
Help
Entry
120650963 CDS
T07260
Name
(RefSeq) SKP1-like protein 13
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120650963
04120 Ubiquitin mediated proteolysis
120650963
09126 Chromosome
03083 Polycomb repressive complex
120650963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120650963
04121 Ubiquitin system [BR:
pvir04121
]
120650963
03036 Chromosome and associated proteins [BR:
pvir03036
]
120650963
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120650963
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120650963
Cul7 complex
120650963
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120650963
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120650963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
FbpC-like_RD
Motif
Other DBs
NCBI-GeneID:
120650963
NCBI-ProteinID:
XP_039784213
LinkDB
All DBs
Position
9K:complement(25333993..25335198)
Genome browser
AA seq
217 aa
AA seq
DB search
MAPPATAADRREGKRPTEEHPAAAAAVGGAEAGDGDDLVLVADCGAEVRLSRSAARMSTT
IVHMMDDCAEGRVPVAGVHAGVLRLMAAYCERHAPHYDPAASAARLRDPFPPFPIEFAPA
AHPIRPVTDPGPDPHGLEAWDYKFIADLPDNSALFAVILAANYLAIEDLVDLGCTAVADK
MRGKTPEQIRVAFDIENDYTPEQEAEVRRENAWAFED
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggctcccccagccaccgccgccgacaggcgcgagggcaagcgccccacggaagagcac
ccagccgccgccgccgctgtgggaggcgccgaggccggcgacggcgacgacctcgtcctg
gtggcggactgcggcgcggaggtgcgcctctcgcgctccgcggcgcggatgtcgacgacg
atcgtccacatgatggacgactgcgcggagggccgcgtccccgtcgcgggcgtccacgcc
ggcgtcctccgcctgatggcggcgtactgcgagcgccacgcgccgcactacgacccggcg
gcctccgcggccaggctccgcgacccgttcccgccgttccccatcgagttcgcgcccgcc
gcccaccccatcaggcccgtcaccgaccccgggcccgacccgcacggcctcgaggcctgg
gactacaagttcatcgccgacctccccgacaactccgccctcttcgccgtcatcctcgct
gccaactacctggccatcgaggacctggtcgacctgggctgcacggccgtggccgacaag
atgagaggcaagacgcccgagcagatccgcgtcgccttcgacatcgagaacgactacacg
cccgagcaggaggccgaggtcaggagggagaacgcctgggcattcgaggattga
DBGET
integrated database retrieval system