KEGG   Panicum virgatum (switchgrass): 120650963
Entry
120650963         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120650963
   04120 Ubiquitin mediated proteolysis
    120650963
  09126 Chromosome
   03083 Polycomb repressive complex
    120650963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120650963
   04121 Ubiquitin system [BR:pvir04121]
    120650963
   03036 Chromosome and associated proteins [BR:pvir03036]
    120650963
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120650963
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120650963
   Cul7 complex
     120650963
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120650963
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120650963
SSDB
Motif
Pfam: Skp1 Skp1_POZ FbpC-like_RD
Other DBs
NCBI-GeneID: 120650963
NCBI-ProteinID: XP_039784213
LinkDB
Position
9K:complement(25333993..25335198)
AA seq 217 aa
MAPPATAADRREGKRPTEEHPAAAAAVGGAEAGDGDDLVLVADCGAEVRLSRSAARMSTT
IVHMMDDCAEGRVPVAGVHAGVLRLMAAYCERHAPHYDPAASAARLRDPFPPFPIEFAPA
AHPIRPVTDPGPDPHGLEAWDYKFIADLPDNSALFAVILAANYLAIEDLVDLGCTAVADK
MRGKTPEQIRVAFDIENDYTPEQEAEVRRENAWAFED
NT seq 654 nt   +upstreamnt  +downstreamnt
atggctcccccagccaccgccgccgacaggcgcgagggcaagcgccccacggaagagcac
ccagccgccgccgccgctgtgggaggcgccgaggccggcgacggcgacgacctcgtcctg
gtggcggactgcggcgcggaggtgcgcctctcgcgctccgcggcgcggatgtcgacgacg
atcgtccacatgatggacgactgcgcggagggccgcgtccccgtcgcgggcgtccacgcc
ggcgtcctccgcctgatggcggcgtactgcgagcgccacgcgccgcactacgacccggcg
gcctccgcggccaggctccgcgacccgttcccgccgttccccatcgagttcgcgcccgcc
gcccaccccatcaggcccgtcaccgaccccgggcccgacccgcacggcctcgaggcctgg
gactacaagttcatcgccgacctccccgacaactccgccctcttcgccgtcatcctcgct
gccaactacctggccatcgaggacctggtcgacctgggctgcacggccgtggccgacaag
atgagaggcaagacgcccgagcagatccgcgtcgccttcgacatcgagaacgactacacg
cccgagcaggaggccgaggtcaggagggagaacgcctgggcattcgaggattga

DBGET integrated database retrieval system