Panicum virgatum (switchgrass): 120651026
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Entry
120651026 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120651026
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120651026
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GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
120651026
NCBI-ProteinID:
XP_039784287
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Position
9K:26404290..26406255
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AA seq
389 aa
AA seq
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MDSPASLTLPDRSGLYLCDSTSCRLAMSISTSSVGSSGAPPQPSSRSSITAAAATGKHQL
KISSYSLTTAVPRGAHIKSSNFQAAGYSWYINYFPNGCGRLLKRACGYVSLQLVLDGAAA
AAGAVKAQFTLSLLNQTGQPVPETVRKSPVHNLAGGWWFHRFIKKEELERPFRGLLRDDA
FTLQCEVVVLDRFRAVKTAPFVEVPPPDLPRHLGELLLSGEASDVTLQAGGVRFDAHRCV
LAARSPVFKAELLGSMREGTSNCDIHIEDMEPRVLKAVLQFMYTDALPEVDKKEEAAMSQ
HLLEAADRFNLQRLKLLCEDKLCGCIDTGSVVTTLVLAEQHGCQGLKEKCFEFLKSTGLS
AVMATDGFNHLASSCPTVLEELMSKLTLH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggattcccctgcttcccttacgctccctgatcgatcgggactctacctttgcgattct
accagctgcaggctcgcaatgtcgatctcgacctcttccgtcggcagtagcggcgcgccc
ccgcagccttcgtcccgctcctccatcaccgctgccgcggccaccggcaagcatcagctc
aagatctccagctactcgctcaccacggcggtgccccgcggcgcccacatcaagtcctct
aatttccaggccgccggctacagctggtacatcaactacttccccaacggctgcggccgc
ctgctcaagcgcgcctgcggctacgtctccctgcagctcgtcctcgacggcgccgccgcc
gccgccggggccgtcaaggcgcagttcaccctctccctgctcaaccagaccggccagccc
gtcccggagaccgtgcgcaagagccctgtgcacaatctcgccggcgggtggtggttccac
aggttcatcaagaaggaggagctggagcgccccttccgggggctcctcagggacgacgcc
ttcacgctccagtgcgaggtcgtcgtcctcgacaggttccgcgcggtgaagacggcgccc
ttcgtggaggtgccgccgccggacctgccgcgccacctcggggagctgctcctgagcggg
gaggcctccgacgtcacgctccaggccggcggggtgaggttcgatgcccaccggtgcgtg
ctcgccgcgcgatcgccggtgttcaaggcggagctcctcggctccatgagggagggcacc
agcaactgcgacatacacatcgaggacatggagccacgcgtgctcaaggccgtgctgcag
ttcatgtacaccgacgcgctgccggaggtggacaagaaagaagaagcggccatgtcgcag
catctgcttgaagcggccgacaggtttaacctccagaggctgaagctcttgtgcgaggac
aagctgtgcgggtgcatcgacacgggctcggtggtgaccaccctcgtgctggccgagcag
cacggctgccaggggctcaaggagaaatgcttcgagttcctcaagtccacaggtctgagt
gcggtcatggcaaccgatggcttcaaccacctggcaagtagctgccccaccgtgctggag
gaactcatgtccaagctcactcttcactga
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