Panicum virgatum (switchgrass): 120651063
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Entry
120651063 CDS
T07260
Name
(RefSeq) flowering locus K homology domain-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120651063
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120651063
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
120651063
NCBI-ProteinID:
XP_039784345
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Position
9K:complement(27193639..27210619)
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AA seq
586 aa
AA seq
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MAKMQSSSKEQEVHKVAGKSREQSPLKQGSVDNEDSGGTTPSAGENRYPGWPGTSVFRML
IPSHKVGAIIGNKGERVRRLCEETKACVRIIGGHLCAAEQAVIIFRKEQPDEPLPPAMDA
LLRVYQQTIKDDNLDLGSNSTIVTRILTPSEQATSLIGEQGAMISSIMQASQTNIRVLDG
DLPPVALEEDKVIEIWGLPAGVHKALELVASHLRKYLVDRSVIPLFDHHVPMPISHTDMP
PCHYIDYPDGPVRAVSPGYHSVCAEDFHCEPWSDISYSRVRHPIESLLHADAFEHRWETS
TSFRRYRSVTPPNYARSAYWPEASSPMEAYHSAPMELHSHCNLIHGWHATPISPTAFVER
VRSLISVYGQQAHPQRQTYQSDEMCKHPRFGKSLHVSEAHPTRVSPSDATELPPNSGISA
CGQEAFPPFRMRPPTTVENLLHCRVSACGPEAPQHQTPPASTSRSAAVASQVKKKMQVPI
FYAEAVIGPSGERIEYIRRTSRSSILINNSEESIMSIEITGSAATDVLTAEQLIKNFMAE
AAAASPGHTFDFIPPYLPASRSPIANILTTEKSSVTLPEQRLQMIY
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgcagtcaagttccaaggagcaagaggttcataaagtggcaggcaaatcc
cgtgagcaaagccccctgaaacaaggctctgttgataatgaagactctggtggtactacc
ccctctgctggtgaaaacaggtatcctggttggcctggaaccagtgtcttcaggatgctg
attccttcacataaagtcggtgcgataattggcaacaaaggtgaaagggttagaagactg
tgtgaggaaacaaaagcctgtgtccgaattataggtggccatctttgtgcggcagagcaa
gctgtaatcatttttagaaaggagcagcctgatgagccattacctccggccatggatgca
ctactaagagtatatcaacaaacaattaaagatgataatttagatttgggatccaatagt
acaattgtgacacggattcttacaccaagtgaacaggcaacaagccttattggtgaacag
ggtgcgatgataagttcaatcatgcaagcttctcaaactaatatccgtgtccttgatggt
gacctgccgcctgttgcactggaagaagataaggttattgaaatatggggactgcccgca
ggagtgcataaggcgttggaacttgttgcttctcatctgaggaagtatctggttgatcgg
agtgtcatcccattgtttgaccatcatgtccctatgccaatatcgcacacggacatgcct
ccatgccactacattgactatcctgatggccctgtgcgtgcagttagtccaggctatcac
tctgtatgtgctgaagattttcattgtgaaccatggagtgacatttcctattcgagggtc
aggcatcctattgaaagtcttctacatgctgatgcatttgaacacagatgggagacatct
acatcattcaggcgatatcgatcggttacaccaccaaactatgctagaagtgcatattgg
ccagaagcatcttcaccaatggaggcatatcattcagctcctatggaattacattcacac
tgcaacctcatacatggatggcatgcaactccaattagtccaacagcttttgttgaaaga
gttcgctcccttatatctgtgtatggacaacaagcacatccacagagacagacatatcaa
tcagatgaaatgtgtaaacatccacgctttggaaaatctttacatgtaagtgaagctcat
ccaaccagggtgtctccatcagatgctactgaactacctccaaattctggtatttctgca
tgcggacaagaagcatttccacccttcaggatgcgtccaccaactaccgtggaaaatctt
ctacactgtcgtgtatctgcatgtgggccagaagcgccacagcatcagactccgcctgca
tcaaccagtcggtctgcagcagttgcttctcaggttaaaaagaagatgcaagttccaata
ttctatgctgaagctgtaattggcccatctggtgaaagaattgaatatattcgtcgtacc
agcaggtcgagcattttgataaacaattctgaggagagcataatgtctattgagatcact
ggaagtgctgcaactgatgttctaactgcagaacagctgattaagaactttatggctgaa
gcagctgctgcctcccctggtcatactttcgacttcattccaccatatttgccagcatcc
agatctcccattgctaatattcttactactgagaaaagcagtgtcactttgccagaacag
cgcctgcaaatgatatactga
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