Panicum virgatum (switchgrass): 120651113
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Entry
120651113 CDS
T07260
Name
(RefSeq) homeobox-leucine zipper protein HOX23-like
KO
K09338
homeobox-leucine zipper protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120651113
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
120651113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
HALZ
Homeobox_KN
DivIC
OVT1
IPGAL2_N
Bfr1
Motif
Other DBs
NCBI-GeneID:
120651113
NCBI-ProteinID:
XP_039784422
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Position
9K:complement(28150088..28152490)
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AA seq
366 aa
AA seq
DB search
MKPMATNGMAPSFFPANFLLQMQQPLPHHPQQQEHHHHHHDAGHHEHEVAHHLLAPPPPA
LVSPFLHDFGGAMAAPPMLGGGLGKLMYPDGAGDDGNSLQQHAAAADPQQQDGGAGSDDE
EGSAAAGGGCGGERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQVAIWFQ
NRRARWKTKQLEKDYDALRRQLDAARAENDALLAHNKKLHAEVMALKGGGGGGGGERQEA
ASELINLNVKETEASCSNRSENSSEINLDISRPPAPAPGADESPAAMNSHRGLPFYASAA
VDQLLHSGHPSPAAAAAPKMELGHGAAADTPSAAGAAGSFGSLLCGAVVDEQPPFWPWAD
GHHNFQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatggccaccaatggcatggccccctccttcttccccgcaaacttcctgctc
caaatgcagcagcccctccctcaccatccccagcagcaggaacaccaccaccaccaccat
gacgccggccaccacgagcacgaggtggcgcaccatctcctcgctccccctccccccgcc
ctcgtcagccccttcctccacgacttcggcggcgccatggccgcgccgccaatgctgggc
ggcggcctcggcaagctcatgtaccccgacggcgcgggcgacgacggtaacagcctgcag
cagcacgcggcggcggcggatccgcagcagcaggacggcggcgcggggtcggacgacgag
gaaggctccgccgcggcgggcggcgggtgcggcggggagcggaagcggcggctgagcgtg
gagcaggtgcgcacgctggagcggagcttcgaggtggccaacaagctggagccggagcgg
aaggcgcagctggcccgcgcgctggggctgcagccccggcaggtggccatctggttccag
aaccggcgcgcgaggtggaagacgaagcagctggagaaggactacgacgcgctccgccgc
cagctcgacgccgcccgcgccgagaacgacgccctcctcgcccacaacaagaagctccac
gccgaggtcatggcgctcaagggaggcggaggcggcggcggaggagagaggcaggaggcg
gcgtcggagctcatcaacctcaacgtcaaggagacggaggcgtcctgcagcaaccgcagc
gagaacagctccgagatcaacctcgacatctccaggccgccggcgccggcgcccggcgcc
gacgagagccccgccgccatgaacagccaccggggcctcccgttctacgcctccgccgcc
gtcgaccagctccttcatagcggccacccgtccccggccgccgccgcggcgcccaagatg
gagctcggccacggcgccgccgccgacacgccctccgccgcgggggcggccggcagcttc
ggcagcctcctctgcggcgccgtcgtcgacgagcagccgccgttctggccctgggccgac
ggccaccacaacttccagtga
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