Panicum virgatum (switchgrass): 120651137
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Entry
120651137 CDS
T07260
Name
(RefSeq) protein OPAQUE1-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120651137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120651137
04131 Membrane trafficking [BR:
pvir04131
]
120651137
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120651137
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120651137
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120651137
mRNA cycle factors
P-body specific factors
120651137
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120651137
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120651137
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120651137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
AAA_22
AAA_16
Zeta_toxin
Mis12
TSC22
AAA_lid_6
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120651137
NCBI-ProteinID:
XP_039784459
LinkDB
All DBs
Position
9K:28967119..28995237
Genome browser
AA seq
1507 aa
AA seq
DB search
MMFRPGTAVWVEHADLTWAEAEVVSSPASPSSKSSVTVVLSTGVKAVVDGRKVLPRDTEA
DLGGVDDMTKLVYLHEPGVLCNLARRYTLNEIYTYTGRILIAVNPFAKLSHMYNMHMMEQ
YRGVQFGELSPHVFAIADASYKAMVSENRSQSILVSGESGAGKTETTKLIMRYLTFVGGR
ATGDVRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDKSGRISGAAVRTYLL
ERSRVVQISESERNYHCFYQLCASGQDADKYKLSHPRNFNYLNQSHMYELEGVSEAEQYL
QTRRAMDIVGICFSDQEAIFRTVAAILHLGNIEFSPGKDFDSSVIKDENCKFHLQMAADL
LMVDASLLLSILCYRTIKTPEGNIVKAVDSSAAVIGRDTLAKTVYARLFDWLVDNINKSI
GQDVESRSQIGVLDIYGFECFKYNSFEQLCINFANEKLQQHFNKHVFKMEQEEYKTEEIN
WSYIEFVDNQDILDLIEKKPIGIVSLLDEACMLGKSTHETFAMKLFQNLRAHPRLEKPKL
SKTDFALFHFAGKVTYQTDLFLEKNRDYVIAEHQNLLSSSKCSFISGLFASHQDDPSKSS
YKFSSVASRFKQQLQALMETLSSTEPHYIRCIKPNSLNCPQKFENGSVLQQLRSGGVLEA
IRISLAGYPTRRTYSEFINRFGLLVPEHMDERFDERSLTQRILKQLNLENFQLGRTKVFL
RAGQIAVLDSRRGEILDNASRILQGHFRTFIARKKFLSTRKASISIQIYCRGCLARNVLE
AKKQIAAAVSVERYARRWLCRCAYLHLRSAALVIQSGIRYILAVQRLRHLENAKASTVIQ
AWWRMQELHNFHQQYRRATVLIQCCWRQKLAKRALRNLKHAAYEAGALREAKGKLEKSLE
DLTLRFTLERRQRLAAEESKALEISKLVKILDSVKLELEASNEENKRNCKKIASLQHQLE
LSSKDQEALHNSLSQMEEVKRENISLKESNAKMEQELLKAQKCSHDNMDKLHDVEKNYVY
LRDNLKNLEDKISNLEDENHLLRQKALNLSPRHSRTGSYQIGASPCSPRSFYESSPVKLA
PLPHNTTELRSRMNSDRHEDYHDVLQRCIKDDMGFKKGKPVAACIIYKCLLHWGVFEAER
TTIFDFIIHTINNILKTENENDILPYWLANASALLCMLQRNLRSKGFIMAPSRSSSDTHL
SEKANETFRYPLKAFGQRTSMSHIDARYPAMLFKQQLTASLEKIFGLIRDNLKKEISPLL
SLCIQAPKLARGGSGRRSGSPDVAVQQPISTHWDRIVKFLDSLMDRLHKNFVPSFFIRKL
VTQVFSFINVQLFNSMLLRRECCTFSNGEYVKSGLCVLEKWIAEAEEEHAGASWDELKFI
RQAVDFLIIPHKSKKTLEQIKRNICPALSVRQIYRICTMYWDDKYGTHSVSAEVVAKMRD
MVSNDTQNPVSNSFLLDDDLSIPFTTEEIAEEVPDVDMSNIEMPSSLRHVHSAQFLMQHL
QSSYLSR
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgccccggcaccgccgtgtgggtggagcacgcggacctcacctgggccgag
gccgaggtggtatcctcccccgcctccccgtcctcgaagtcctcggtcacggtcgttcta
tccaccggcgtcaaggccgtggtggacggtaggaaggtcctgccgcgggacacagaggcc
gatctcgggggcgtcgacgacatgaccaagctcgtctacctccatgaacccggggtgctt
tgcaacctcgcgcgacgatacacacttaacgagatatacacatacacagggcgcatcttg
atcgctgtaaatcctttcgcaaagctgtctcatatgtacaatatgcatatgatggagcag
tacagaggcgtgcagtttggtgaattgagtccacatgtttttgccattgcagatgcatca
tacaaagctatggttagcgagaaccgcagccagtccatattagtcagtggagaaagtggt
gctgggaaaacggaaaccaccaagctcattatgcgatatcttacttttgttgggggccgt
gcaactggtgatgtccgctctgtggagcaacaagttctagagtcaaatccactgttggag
gcttttggtaatgcacggactgtgagaaatgacaactccagtcgatttgggaaatttgtt
gaaattcagtttgataaatctggtagaatatctggggctgcagttcgaacttatctcctg
gaacggtctcgtgttgtgcaaatttctgaatctgaaaggaattaccactgtttttatcaa
ctttgtgcatctgggcaggatgcagataaatacaagctttctcaccctaggaactttaac
tacttgaatcaaagccatatgtatgaattagaaggggtcagtgaggcagagcaatattta
caaacacggagagcaatggacattgttggtatatgtttttctgaccaggaagctatattc
cgtactgtggctgctatccttcatctagggaatattgaattttctcctggaaaagacttt
gattcatctgttattaaggatgaaaattgcaaattccatctacagatggctgctgatttg
cttatggttgatgcaagccttttgctttcaattctgtgctatcgcacaattaaaactccc
gaaggaaacatagtaaaggcagttgacagttctgcagctgtcattggtcgtgatacactt
gcgaagactgtttatgctcgactatttgattggcttgttgacaacattaataagtccatt
gggcaggacgtcgaatcaaggtcacaaattggggtcctggacatatatggcttcgagtgt
ttcaaatataacagctttgagcagttgtgcatcaattttgctaatgaaaagctccaacag
cattttaataagcatgttttcaagatggagcaggaggaatataaaacagaagaaatcaat
tggagctacattgaatttgttgataaccaagatatattggatcttattgaaaagaaacca
ataggcatagtttcactattggatgaagcatgcatgctcgggaagtcaacacatgaaact
tttgcaatgaagttatttcagaatttaagagcacatccaagactagaaaaaccaaagctc
tcaaagacagattttgccctatttcattttgctggaaaggtgacctaccaaactgattta
tttttagagaagaaccgagattatgttatagcagagcaccagaatcttttgtcttcttca
aaatgctcatttatttctggtctcttcgcttcacaccaagatgacccctcaaaatcatct
tataagttttcttcagtagcttcacgatttaagcaacaactccaagcactaatggagaca
cttagctcaacggaacctcactacatccgttgcataaaaccaaattctctgaattgtccg
cagaagtttgaaaacggcagtgttctacagcaactgcgtagtgggggtgtccttgaagct
attaggataagtcttgctggttatcccacacggagaacatactctgaattcattaatcgc
tttggacttcttgtgccagaacatatggatgaaagatttgatgagagatcactgacacag
aggatcctaaagcaactaaaccttgagaactttcaacttggcaggacaaaagtttttctc
cgggctggccagattgctgttttggactccagacgtggtgagattctggacaatgcttcc
aggatcttgcagggtcactttcgaacctttattgctcgcaagaaatttctttcaacgagg
aaagcttctatctccatccaaatatattgccgagggtgtttagcacggaatgtgcttgaa
gctaagaaacagatagcagcagctgtttcagttgaaagatatgctcgaagatggttgtgt
cgttgtgcatatttgcatcttcgttctgctgctcttgtgatccaatctggtattcgctat
atcttagcagttcagagattgcggcacttagagaatgctaaagcttctactgttatacag
gcttggtggaggatgcaggagctccataatttccatcagcaatatcgaagggcaacagtt
ctcatccagtgctgttggagacagaagcttgctaaaagggcattgcggaaccttaaacat
gctgcatatgaagctggagctttacgtgaagcaaaaggaaaactcgagaagagcttagaa
gatcttactttacgattcaccttagagaggaggcaaaggcttgctgctgaagagtcgaag
gcattggagatatctaagcttgtcaaaatcttggattctgtgaagttagaattagaggca
tcaaatgaagaaaataaaaggaattgcaagaaaattgcttcgctccaacatcagttagag
ttatcatccaaggatcaagaagctctgcataacagtctttctcaaatggaagaagtgaag
agggagaatatttcactgaaggaaagtaatgcaaaaatggaacaagagctattaaaagct
caaaaatgtagccatgataatatggataagctgcacgatgtggaaaagaactatgtgtat
ctccgggataacttgaaaaacttagaggataagatctcgaatttagaagatgagaatcat
ttattgagacagaaggccttgaacttatctcctaggcacagccgaactgggagctatcag
atcggggcttcaccatgcagcccaaggtcattctatgaatcttcacctgtaaaattggca
cctctcccacataacactacagaactaaggtcaaggatgaattctgatagacatgaggat
tatcatgatgtgctccaacgatgcatcaaagatgatatgggattcaagaagggaaaacca
gttgcagcctgtatcatttacaaatgccttctccattggggagtattcgaggctgaaaga
acaactatttttgacttcataattcacacaattaataacatcctgaagacagaaaacgag
aatgacattttgccctactggctagccaatgcttctgcccttctatgcatgttacaaaga
aatttaaggtcaaaaggattcataatggcaccctctcgatcatcttcagatactcactta
agtgaaaaggcaaatgaaacattccggtatcctttgaaagcctttggtcagcggacaagc
atgtcacacattgatgctcggtacccggccatgctatttaaacaacaacttactgcctcc
ttggagaagatctttggattaattcgtgacaatctaaagaaagagatatcacctctttta
agcctttgcattcaggcaccaaaacttgctcgaggaggcagtggaaggaggtcgggatct
cctgatgtggccgtgcagcaaccaataagtactcactgggatcggattgttaagtttttg
gactcattgatggatagactacataaaaattttgtgccttcttttttcatccgcaagcta
gtaactcaagttttttccttcattaatgtacagttgttcaatagtatgcttctacgacga
gaatgttgcacattttcaaatggagaatatgtgaagtctgggctttgtgtacttgagaaa
tggattgcggaggctgaagaagagcatgcaggtgcatcttgggatgagctgaagttcatt
aggcaagcggttgactttctgatcattccacataaaagcaaaaagacccttgagcagatt
aagaggaatatttgcccggcattaagtgtgagacagatatatcgtatatgtacgatgtac
tgggatgacaaatatggtacccatagtgtatcagctgaggttgttgccaaaatgagggac
atggtgagcaacgacactcaaaatcctgtgtccaattcatttcttctagatgatgactta
agcattccattcacaaccgaagaaatagcagaggaagtaccagacgttgacatgtcaaac
attgaaatgccctcatcgcttcgtcatgttcactctgctcagttcttgatgcagcacctt
cagtcgtcttacctgtcgcgatga
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integrated database retrieval system
