Panicum virgatum (switchgrass): 120651219
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Entry
120651219 CDS
T07260
Name
(RefSeq) calmodulin-binding transcription activator 3-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120651219
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Others
120651219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
IQ
Ank_2
Ank
TIG
Ank_4
Ank_3
RRP36
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
120651219
NCBI-ProteinID:
XP_039784577
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All DBs
Position
9K:complement(30672561..30685919)
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AA seq
1026 aa
AA seq
DB search
MASAEARRLAVVPQLDIEQILKEAQHRWLRPAEICEILKNYRNFRIAPEPPNRPPSGSLF
LFDRKVLRYFRKDGHNWRKKNDQKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRTYW
MLEEDFMHIVLVHYLETKGGKSSRARVNNNMIQEAAVDSPLSQLPSQTIEGESSLSGQAS
EYEEAESADIYSGGAGYHSFTGMQQHENGTGPVIDSSVFSPYTPASSIGNYQGLHPMTQN
TSFYPGNQHSSLVLNGSSTGVATNGYANQTDPTSWNPVIELDNGPVQMPLQFPVPPEQGT
STEGLGIDYLTFDEVYSDGLSLKDIGAAGASGESFWQFPGATGDLSAPESNFPQPNDGSL
EAAIGYPFLKTQSSNLSDILKDSFKKTDSFTRWMSKELLEVEDSQIQSSSGAYWSTEEAD
SIIEASSREPLEQFTVSPMLSQDQLFSIVDFAPTWTYVGSKTKILVTGSFLNNSKVTERC
KWSCMFGEVEVPAKILADGTLLCYSPQHKPGRVPFYITCSNRLACSEVREFEFRPTVTQY
MDAPSPHGATNKVYFQIRLDKLLSLGPDEYQATVSNPSLEMIELSKKISSLMASNDEWSN
LLKLAVDNEPSTDDQQDQFAENLIKNKLHVWLLNKVSVGGKGPSVLDDEGQGVLHLAAAL
GYDWAVRPTLAAGVNINFRDVHGWTALHWAAFCGRERTVVALIALGAAPGALTDPYPDFP
ESTPADLASANGQKGISGFLAESSLTSHLQALNLKEANMAEISGLPGIGDVTERDSLQPP
SGDSLGPVRNAAQAAARIYQVFRVQSFQRKQAAQYEDDKGGLSDERALSLLSVKPSKPGQ
LDPLHSAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIVWSVGIVEKV
ILRWRRRGAGLRGFRSTEASTEGSSGGTRSNMIKDKPSGDDYDFLQEGRKQTEERLQKAL
ARVKSMAQYPEARDQYQRILTVVSKMQESQAMQEKMLEESAEMDDGYFMNELQELWDDDT
PLPGYF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggaggcgcgccgcctcgcggtcgtgccgcagctagatatcgagcagata
ctgaaggaggctcaacaccgttggttacgccctgctgaaatatgtgaaatacttaaaaac
tacaggaacttccgtattgctccagaaccaccaaataggccaccaagtggttcacttttt
ttatttgatcggaaagtattgaggtacttcaggaaggatggccataattggcggaagaaa
aatgatcagaagactgtcaaggaagcccacgaaaggctgaaatctggaagtattgacgtg
cttcactgttactacgcccatggggaagagaatataaattttcaaaggaggacttactgg
atgctggaagaggactttatgcacattgtacttgtgcattatcttgaaacaaagggtggg
aagtcatctcgtgctagggtaaataataacatgattcaagaagctgctgtggatagtcct
ttaagtcaattaccctcacagactatagagggtgaaagctcacttagtggacaagcctca
gagtacgaagaagcagaatcagcagatatttattcaggaggagccggataccactctttc
actgggatgcagcagcatgaaaatggaactggacccgtgatagattcttctgtcttcagc
ccatacacacctgcttcatccataggcaattaccaggggctgcatcccatgacacaaaat
acaagcttctatcctggtaaccaacatagttctctggttcttaatggatcaagcacgggg
gttgcaacgaacgggtatgcaaatcaaactgatcctacatcgtggaatccggtgatagaa
ctagacaatgggcctgttcaaatgcctctccagtttcctgttcctcctgagcaaggcact
tccacggaaggcttgggaattgactatttgacattcgatgaagtatattctgatggcctc
agtctcaaggatattggcgctgcaggagctagtggagaatcattttggcagttccctggt
gctacaggtgatttgtctgcaccagagagcaacttcccacagccaaatgatggttctctg
gaggcagccattggctatccatttttgaaaactcagtcatccaatctatctgatatccta
aaagacagctttaagaaaactgacagttttacaagatggatgagcaaagagcttcttgaa
gtggaggattcccaaattcaatctagttctggggcatactggagcactgaagaagcagat
agtatcattgaagcatcaagccgtgagccgctggaacagttcactgtttccccaatgctc
tcgcaggaccagctctttagtatagttgattttgctccaacctggacctatgtgggatca
aagaccaagattttagttactggtagcttcctgaataacagtaaagtcactgagagatgc
aagtggtcatgtatgtttggagaagttgaagttccagcaaaaattttagcagatggtact
cttctctgttattcgccccagcataaacctggtagagtacctttctatatcacctgctcc
aacaggttggcctgcagtgaagtgcgagagtttgaatttcgaccaactgtcacccaatac
atggacgctcctagtccacatggtgcaacaaacaaagtttatttccagatacgtcttgat
aaactgttgtcccttggaccagatgaataccaggcaactgtatccaatcccagccttgag
atgattgaattaagcaagaagataagttcactaatggcgagcaatgatgagtggtccaac
ttgttaaagttggctgttgataatgagccttctactgatgatcagcaggatcagtttgct
gaaaacttgattaagaataaattgcatgtctggcttctcaataaagttagtgtgggtggt
aagggacccagtgtgttagatgatgaaggacagggcgtgcttcacttagcagctgccctt
ggatatgattgggctgtaaggccaacacttgctgctggcgtgaatataaatttcagagat
gttcatgggtggactgctctccactgggctgccttttgtggccgagagcggactgtagtt
gcgcttattgccctgggagcagctcctggagctttgacagatccatatcctgacttccct
gaaagtacaccagcagatcttgcatctgctaatggtcaaaagggaatatctggtttcttg
gcggagtcctctctgacgagtcatcttcaggccctcaatcttaaggaagctaatatggcc
gaaatatctggtctgcctggtattggagatgttacagagagggattcattgcagcctcca
agcggagattcattgggtcctgttcgaaatgctgctcaagctgctgctcggatatatcaa
gtttttagggtgcaatccttccagaggaagcaagcagctcaatatgaggatgataaaggt
gggttgtcagatgagcgtgccctttcactcctttctgtcaagccatccaagccagggcag
cttgatcccctgcattctgctgcaactcgtatacagaataaattcaggggatggaagggg
agaaaggaatttcttcttatcaggcagcgtattgtcaagatccaggctcatgtgcgaggt
caccaagtgaggaagcattatcggaaaatagtttggtctgttgggattgttgagaaagtt
atcctgcgctggcggcgaagaggggctgggttacgtgggtttcggtctacagaagcttca
acagagggcagcagtggcggaacacgtagcaatatgatcaaagataagccttctggagat
gactatgatttcttgcaagaaggacgaaagcaaactgaagaacggctccagaaagctctt
gccagagtgaagtccatggctcaatacccggaagcaagggaccagtaccagaggattttg
actgttgtgtcaaaaatgcaggagtcccaggctatgcaagaaaagatgctcgaggagtcc
gcagagatggacgatggttatttcatgaatgaattgcaggagctgtgggatgatgataca
cctcttcctggttatttctag
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