Panicum virgatum (switchgrass): 120651340
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Entry
120651340 CDS
T07260
Name
(RefSeq) probable amidase At4g34880
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00330
Arginine and proline metabolism
pvir00360
Phenylalanine metabolism
pvir00380
Tryptophan metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120651340
00360 Phenylalanine metabolism
120651340
00380 Tryptophan metabolism
120651340
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
120651340
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Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-GeneID:
120651340
NCBI-ProteinID:
XP_039784751
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Position
9K:38929865..38933616
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AA seq
514 aa
AA seq
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MAMPPSLRFLILLLLAGTGGATAAAFELEEATIDSIHRAFAAGELTSRGLVELYLRRIAS
LDPSLHAVIELDPDGALASADRADAAARSGSSALPQLHGIPVLLKDNIAAAGTLNATAGS
IAMVGSRPARDAGVVERLRNAGAVLLGTASLSEWCNFRGPGIPAGWSPRGGQGKNPYVPS
ATPCSSSSGSAIAAAANMAAITIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISP
RMDTVGPITRTVSDAVHVLEAIVGYDARDAEATHKASQYIPEGGYRQFLNIDGLRGKRLG
ILRKDFFRFPSGSVQEMVFSEHFNIMSKMGAILEDNLEIPSMNVINDAVQSGERALMLAE
FKLSLNSYLSELATSPVRSLSDIINFNNKHPIEERLAEFGQDYLIQSQATNGIGPTEERA
IARLNKLCKRGLEKVMQDNLLDAIVAPGASAHSLLAIGGYPAITVPAGYASNGVPFAICF
GGLKGSEPKLIEIAFSFEQATKVRKSPSLQHSII
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccgccgtcgctacgttttctcatcctcctgctcctcgccggcacgggcggg
gccacggccgctgcgttcgagctggaggaggccaccatcgattccatacaccgtgccttc
gccgctggcgagctcacctcccgcggcctcgtcgagctctacttgcgccgcatcgcgtca
ctggacccctcgctccatgccgtcatcgagctcgaccccgacggcgcgctagcatcagcc
gaccgcgccgatgccgccgcccgctccggctccagcgcgctcccgcagctgcacggcatc
ccggtgctgctcaaggacaacatcgctgcggccgggacgctgaacgcgacggccggatcc
atagccatggtcgggtcacgtcccgcgcgcgacgccggcgtggtcgagaggctccggaac
gccggcgcagtgctcctcggcaccgccagcctcagcgagtggtgcaacttccgcggcccc
ggcatccctgcaggatggagcccccgtggtggccagggcaagaacccgtatgtgccgtcg
gcaacgccgtgttcctccagcagcggctccgcgattgcggcggcagcaaacatggcagca
atcacgattgggactgagacggacggatccatcatgtgcccgtccagctacaactccgtc
gtcgggataaagcccaccgtcggcctcaccagccgtgccggcgtcatcatcatatcacca
aggatggacacagttgggcccatcactagaacagtttcggatgctgtgcatgtgttggaa
gcaattgttggctatgatgcccgagatgcagaggctactcacaaggcttcacaatatata
ccagaaggtggttacaggcaattcttgaacatagatggactaagagggaagaggttggga
attctcaggaaggatttctttcgatttccttctgggtctgtccaagaaatggtcttcagt
gagcatttcaacattatgagtaaaatgggtgccatcttggaggacaaccttgagatacca
agcatgaatgtcattaacgatgccgtgcaaagtggtgaacgtgcacttatgcttgccgaa
ttcaagttgtcgctcaactcctacttatctgagctagccacgtcacctgttagatcatta
tctgacataatcaacttcaacaacaagcaccctatcgaggaaaggctggctgaatttggt
caagactacctcatacaatctcaagcaacaaatggcattggtccaactgaggagcgggcc
attgccagattgaacaaactgtgtaaaagaggcctcgagaaagtaatgcaagataatcta
ctagatgcaattgtagccccaggtgcatctgctcacagcttgcttgccattggcggttat
ccagcaatcactgttccagctggatatgcttcaaatggtgttcctttcgccatctgcttt
ggtgggttgaaaggatcagagccaaagctcattgagatagctttttcgtttgagcaggca
acaaaagtaaggaaatctccttcgctgcagcattccatcatttga
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