Panicum virgatum (switchgrass): 120651381
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Entry
120651381 CDS
T07260
Name
(RefSeq) probable alpha-mannosidase At5g66150
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120651381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120651381
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
120651381
Membrane trafficking [BR:
pvir04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
120651381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
120651381
NCBI-ProteinID:
XP_039784791
LinkDB
All DBs
Position
9K:39871223..39894501
Genome browser
AA seq
966 aa
AA seq
DB search
MATALPLLLAVIAAAATARGASAARAISSAGAATTAAGGKLQVHLVPHSHDDVGWLKTVD
QYYLGSNNSIQRACVMNTLDSVVDALAKDPARKFVVVEQAFFQRWWAEKSPNIQVIVRKL
VDSGQLEFVNGGWCMHDEAAVHYIDMIDQTTLGHRMIKKQFNKTPRAGWQIDPFGHSAVQ
AYLLGAELGFDSVHFARIDYQDREKRKADKALEVIWRGSRTFSSSSQIFANVFPINYSPP
NGFGFEILDESIMPVQDDLMLSDYNVEERVNDFVAAAITQANVTRTNHIMWTMGEDFSHQ
YAESWFRNMDKLIYHVNKDGRVHALYSTPSIYTDAKYASNKSWPVKYDDYFPYADAKNTY
WTGYYTSRPTFKRYVRVHSGYYLAARQIEFLVGRSSLGLFTSSLEDAIGISQHHDAVSGT
AKQHTTDDYSRRLALGASKVEKGVNIALTCLTSSNGTCRSSVVKFSQCPLLNISYCPSTE
EKISAVKSLVVVAYNPLGWERSGFIRVPVNDETLVVKSSDGTIVESQLVEVDNVTSNLRK
FYLKAYLGITTDRPPKYWLVFQALVPPMGWNSYYISRSPGYNNTGYVSTMVSPGNDMVEV
GPGPLKMSFSAESGQLKRIFNPVSGVDLPLQQSFLWYISNDGDTVDSQASGAYIFRPNGT
TPTTVSSSVPLKVIHGPLVDEVHQQFNSWIYQVTRLYKNKEHAEVEYTVRNHREDWNLEM
TEPVAGNYYPVNLGAYIADEKYEVSVLVDRAVGASSIHDGELEIMLHRRTVRDDGKGVDE
PLGEVVCLDGSCKGLTARGTYYVKVDKLGHGPHWRRTYGQQVYSPYLVAFAHEDETNWKS
YNVARASMMDANYSLPNNVAIVTLQNLDDGTTLLRLAHLFQAAEDPQYSVIAKVELRKVF
AKRSIKELTETNLSANQKKSDMKKLNWRVVGDTNSGLTPLKGGPVDSQALVVELGPMEIR
TFLLKF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcacttccgctgctgctggcggtgatcgcggcggccgcgacggcaaggggg
gcatcggcagcgagggcgatctcgagcgcgggagcggcgacgacggcggcgggcggcaag
ctgcaggtgcacctggtgccgcactcgcacgacgacgtcggctggctcaagaccgtcgac
cagtactacctgggatccaacaacagcatccagagggcgtgcgtgatgaacacgctcgac
tccgtggtggacgcgctcgccaaggaccccgcccgcaagttcgtcgtcgtcgagcaggct
ttcttccaaagatggtgggcagagaaaagcccaaacatccaagtgatagttcgcaagctg
gttgattcaggccagctagagttcgtaaatggtggatggtgcatgcatgatgaagctgca
gtccactatattgacatgattgatcaaaccacacttggtcaccgcatgatcaagaaacaa
ttcaataagactccaagggccggctggcaaattgatccttttggacattctgcggttcaa
gcttacttgctgggagcagagcttggctttgattctgtgcattttgcaagaattgattac
caagatagggaaaagcgtaaagcagataaggccttagaggttatatggcgtggctcaaga
actttcagctcatcttcacagatatttgcaaatgtgtttcctatcaattatagtcctcca
aatggctttggcttcgaaattttggatgaaagtatcatgcctgtccaggatgacttgatg
ctgtctgattataatgtcgaagaacgagttaatgattttgttgccgcagccataacacag
gcaaatgttactcgcacaaaccacataatgtggaccatgggggaagattttagtcatcag
tatgcagaatcttggtttcggaatatggacaaacttatctatcatgtgaacaaggatggc
cgagtgcacgcattatattctactccatccatctacacagatgcaaaatatgcatcaaat
aaatcttggccagtaaaatatgacgattatttcccctatgctgatgcaaaaaatacatac
tggactgggtactatacaagccgtccaactttcaaacgatatgttcgagtgcacagtgga
tattacctggcagcacgtcaaatagaatttttagtgggtagaagttccttaggattgttc
actagcagcttggaagacgcgataggaatttcccagcatcatgatgctgtctcaggtaca
gcaaagcaacacacaacggatgattactcgagacgccttgctctcggagcatctaaggtc
gagaaaggtgtgaacattgctctgacctgtctaacaagttccaatggaacatgtcggtcc
tcagtagtaaaatttagtcagtgccctcttctcaatataagctactgcccttcaactgag
gaaaaaatttcagcagtaaagagtttagttgtagttgcctacaaccctcttggatgggaa
cgtagtggcttcataagggtcccggtgaatgatgaaacccttgttgtaaaaagctctgat
ggaactattgttgagtcacaactagttgaggttgataacgtgacaagcaacttaaggaaa
ttttatttgaaggcttatcttggaattacaacagacagaccaccaaagtattggctagta
tttcaagcccttgtgccaccaatggggtggaattcttattacatctcaagatccccagga
tacaataataccgggtatgtctcgaccatggtttctcctggtaatgatatggtcgaagtt
ggacccgggcctctaaagatgtccttttcagcagaatcagggcaactcaagaggatattt
aatcctgtatctggagtggatttaccacttcaacaaagctttctttggtatatatcaaac
gacggtgatactgtggattcacaggcatctggagcatatatatttagacctaatggtact
acaccaaccactgtttcatcttcggtgccgctgaaagttatccatggacctctggttgat
gaagtgcatcaacaattcaactcatggatttatcaggttacacgactctacaagaacaag
gagcatgctgaagttgaatacacggtgagaaaccacagggaagattggaaccttgaaatg
actgaaccggttgcaggaaattactatccggtcaatctaggagcgtatatagcagacgaa
aaatatgaggtgtctgtacttgtggaccgtgctgttggagcatcaagtattcacgatggt
gagctagagatcatgctacataggcgtacagtacgagatgatggcaaaggtgtggatgag
ccactaggtgaagttgtttgtctggatggaagctgcaaggggctcacggccaggggaaca
tactatgttaaagttgacaagctaggccatggacctcactggcgaagaacatatggccag
caagtatattcgccctatcttgtggcttttgctcatgaggatgagacaaattggaaatcc
tataatgttgccagagcaagtatgatggatgcgaattacagtcttcctaataatgttgca
attgtaaccttgcagaatctagatgatggtacgacattacttcgcttggcccatcttttt
caggcagcagaggaccctcaatattcagttatagcaaaagttgaactaagaaaggtgttc
gcaaagagaagtatcaaggagttgactgagactaacctttctgcaaatcaaaagaagtca
gacatgaagaagctcaactggagggtagttggggacacaaatagtggtctcaccccattg
aagggtggcccagttgacagtcaagctcttgtagttgagttgggacccatggaaatacgc
actttcttgctgaagttctga
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