Panicum virgatum (switchgrass): 120651470
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Entry
120651470 CDS
T07260
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120651470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120651470
03032 DNA replication proteins [BR:
pvir03032
]
120651470
03036 Chromosome and associated proteins [BR:
pvir03036
]
120651470
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvir02048
]
120651470
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120651470
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120651470
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120651470
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120651470
Prokaryotic defense system [BR:
pvir02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120651470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
120651470
NCBI-ProteinID:
XP_039784884
LinkDB
All DBs
Position
9K:42192677..42200273
Genome browser
AA seq
930 aa
AA seq
DB search
MAPSSPSSAAPTRVSERKRAAKAEEVCQIQEDEEEALVASSAKRRRGASAGTKPKPPKAG
RKKKAEAERTEPVEDDVCAEEPDEEEMAMGEQEAAEAEAEEQEAAAAPAGSPGKKRVAQP
RKRGAVAAGDHEPEFVGEPVPAAEARTKWPKRYDRSAAAKRPEEDEELKARCHYRSAKVD
NVVYSLDDDVYVKAGENEADYIGRITEFFEGTDHCQYFTCRWFFRPEDTVINSLVSIDVD
GQKHDPRRVFLSEENNDNVLDCIISKVKIVPVDPNMDPKAKAQLIEHCDLYYDMSYSVAY
STFANIPSENGASGSETTSGISDDADLGMSSHMPGRTATLLDLYSGCGGMSTGLCLGAAL
AGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLREWAVLCDQYVNKDVCSD
STVPEDQEDDDSTLDKDEFVVEKLIGICYGGSGRKNGIYFKVQWEGYGPEEDTWEPIDNL
SDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNRFRNRNEPLKDEKNKQMV
TFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSCLVAMNYQARLGMMVAGCYGLPQF
RMRVFLWGALSSMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQRPSLKKALLLGDAI
SDLPQASPFASFIHCATCTCNLILFLQVENYQPHDVMEYSSSPKTEFQRYIRLGRKDMLD
WSFGEEAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVKVGANNIVEWDPE
IERVYLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQAILHPTQARV
LTVRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAFLGESEGSGPLY
ELPASFTSVASVAHARASSVSTPAGEVIEQ
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgagctccccgtcgtccgccgcccccacgcgcgtctccgagcggaagcgcgcc
gccaaggccgaggaggtctgccagatccaggaggacgaggaggaggccctggtggcgtcc
tcagccaagcgccgccgcggggcgtccgccgggacgaagcccaagccgcccaaggcgggg
cggaagaagaaggcggaggccgagaggacggagcccgtggaggacgacgtgtgcgccgag
gagccggacgaggaggagatggccatgggagagcaggaggcggcggaggccgaggccgag
gagcaggaggcggccgcggcccccgcggggtctccggggaagaagagggtggcgcagccc
aggaagaggggcgccgtcgcggccggggaccacgagccggagttcgtcggcgagcccgtc
cccgccgccgaggcgcgtaccaagtggcccaagcgctacgaccgcagcgccgccgccaag
aggccggaggaggacgaggagctcaaggccaggtgtcactaccggagcgccaaggtggac
aacgtcgtctacagccttgacgacgatgtctacgtcaaggctggagaaaatgaggctgat
tatattggccgcattactgaattttttgaggggactgaccactgtcagtattttacttgc
cgttggttcttccgtcctgaggatacggttatcaattccttggtgtccatagatgttgat
ggccaaaagcatgatcccagacgtgtttttctttctgaggaaaataatgacaatgtgctc
gattgcatcatctcaaaagtcaagatagtccctgttgatccaaatatggatccaaaagcc
aaggctcaacttatagagcattgtgacttgtactatgacatgtcttactctgttgcgtac
tctacatttgctaatatcccatcagaaaatggggcatcaggcagtgaaactacttctggt
atttctgatgatgcggatttggggatgtcatcacatatgccagggagaacagcaaccctg
cttgatctgtattctggctgtgggggcatgtccactgggctttgcttgggtgcagcactt
gcaggcctcaaacttgaaactcgatgggctgttgatcttaacagctttgcatgccagagt
ttgaagtacaatcatccacaaactgaggttcggaatgagaaagccgatgagtttcttgct
ctccttagggaatgggcagttctttgcgaccagtatgtcaacaaagatgtgtgttcggat
tcaacagtcccagaggatcaagaagatgatgacagtactcttgataaggatgaatttgtt
gtagagaagcttattgggatatgttatggtggcagtggcaggaaaaatgggatctatttt
aaggtccaatgggaaggatacggtcctgaagaggatacatgggaacccatcgataacctc
agtgactgcccactgaaaattaaagaatttgtacaagaaggttacaggaggaaaattttg
ccattgcctggtgatgttgatgtcatttgtggaggcccaccatgccaggggatcagtggg
tttaatcgattcaggaaccgaaatgagccccttaaagatgagaaaaataaacaaatggtt
actttcatggatattgtggcatacttgaaacccaagtatgttctcatggaaaatgttgtg
gacatactcaaattcgctgatggctacctaggacgatatgctttaagctgcctggtcgct
atgaactaccaagcacggcttggaatgatggtggctggctgttatggtctgccacaattc
cggatgcgtgttttcctttggggtgctctttcttccatggtgctcccaaagtaccctctt
cctacacatgatgttgttgtgcgtggaggggctcctaatgctttttctcaaagcattgtt
gcatatgatgaaactcaaaggccttccttaaaaaaggccttacttcttggtgatgctatt
tcagacttaccgcaggcaagtccttttgcaagtttcatacattgtgcaacctgtacatgc
aatctaattttgtttctgcaggtagagaattatcagcctcatgatgtaatggaatattct
tcttcccccaagacagaattccagcgctatattcggcttggtcgtaaagacatgttggat
tggtcctttggggaggaggctggtccagatgaaggcaaactgttggatcaccagccctta
cggctgaataatgatgattatgagcgtgttcagcagattcctgttaagaagggagccaat
ttccgagacctcaagggtgtaaaggtcggagcaaacaacatagttgagtgggatccagaa
atcgaacgtgtgtacctgtcgtctgggaaacccctggttccagattatgcgatgtcattc
atcaaggggaggtcacttaagccatttgggcgcctgtggtgggatgagacagttcctacc
gttgtgaccagagcagagcctcataaccaggctatattgcatccgactcaggcaagagtc
cttacagtccgggagaacgcaaggttgcagggcttccctgattactaccgattgtttggt
ccgatcaaggaaaagtacattcaagtcggcaatgcagtggctgtccctgttgcccgggca
ctgggctactgtctggggcaagcgttcctgggtgaatcagaggggagcggcccactgtat
gagctgcctgcaagtttcacctctgtggcgagtgtggctcatgcgagggcttcctctgtt
agcactcctgcaggggaggtgattgagcagtaa
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