Panicum virgatum (switchgrass): 120651521
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Entry
120651521 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120651521
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120651521
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120651521
NCBI-ProteinID:
XP_039784947
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All DBs
Position
9K:complement(43305496..43310014)
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AA seq
1156 aa
AA seq
DB search
MASKGILKNSGSSRMPAQGGAGKPPAAPAAAPTVVFGRRTDSGRFISYSRDDLDSEISSV
DFQDYHVHIPMTPDNQPMEDEDGGAAAAARAEERYVSGSLFTGGFNSVTRAHVMDKQDGR
RGGANKGAGACMVEGCDARAMRDARGDVVLPCECDFRICVDCFTDAVKAGGAACPGCKEP
YKNTEWEDLAGGAEVTRALSLPRGPAGANGHKMERRLSLVKQTNANQSDEFDHNRWLFET
KGTYGYGNAIWHQDGADDDADGGAPPGPGHPKELLTKPWRPLTRKLRVPAAVISPYRLLV
LIRLVALAFFLMWRIKHQNQDAIWLWGMSIVCELWFAFSWVLDQLPKLCPISRATDLSVL
KEKFEMPTPNNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVEKLACYVS
DDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFNLKRDPFKNKVKPNFVKDRR
RIKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKMKAGGDEPFEPVKIPKAT
WMADGTHWPGTWLQPSQDHARGDHAGIIQVMLKPPSDMPMYGNINEKSPLDFAGVDTRLP
MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKALREGMCFM
MDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDINMRALDGLQGPVYVGTGCLFRRIA
LYGFDPPRSKDHSPRFCSCCLPRRRKASASNANPEETMALRMGDFDGDSMNLATFPKKFG
NSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTILRDVLDASIVAEAISVISCWYEEK
TEWGIRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTQRDAFRGTAPINLTDRLHQVLRWA
TGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQ
TLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLK
VIAGIEISFTLTSKQVGDDVEDEFAELYIVKWTSLMIPPLTIIMINLVAIAVGFSRTIYS
TIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVSITISLLWIAIKP
PSQAANSQFGGSFSFP
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaggggatcctcaagaacagcggctccagccgcatgccggcgcaaggcggc
gccggcaagccgcccgccgcgcccgccgcggcgccgacggtcgtcttcggccgccggacc
gactccgggcgcttcatcagctactcgcgcgacgacctggactcggagatcagcagcgtc
gactttcaggactaccacgtccacatccccatgacgcccgacaaccagcccatggaggac
gaggacggcggcgccgccgccgccgccagggccgaggagcgctacgtttccggctcgctc
ttcaccggcggcttcaacagcgtcacccgcgcgcacgtcatggacaagcaggatggccgc
cgcggcggcgccaacaagggcgccggcgcctgcatggtcgagggctgcgacgccagggcc
atgcgcgacgcccgcggcgacgtcgtgctcccctgcgagtgcgacttcaggatctgcgtc
gactgcttcacggacgccgtcaaggccggcggcgccgcctgcccgggctgcaaggagccc
tacaagaacaccgagtgggaggacctcgccggcggggccgaggtcaccagggcgctctcg
ctgccccgagggcccgccggcgccaacggccacaagatggagaggcgcctgtcgctggtc
aagcagaccaacgccaaccagtccgacgagttcgaccacaaccgctggctcttcgaaacc
aagggcacctatggctacggcaacgccatctggcaccaggacggcgccgacgatgacgcc
gacggcggcgccccacctggacctgggcaccccaaggagctcttgaccaaaccatggcgc
ccgctcacccgcaaactcagggttccagctgccgtcatcagtccttacaggctcctcgtc
ttaatccgattggtcgccctggccttcttcctcatgtggcgtatcaagcaccaaaaccag
gacgccatttggctctggggaatgtcaattgtctgtgagctctggtttgccttctcatgg
gtactggaccagcttccaaagctgtgccctatcagccgcgcaacagacctctctgtgctg
aaggagaaatttgagatgcccacacctaacaatccaacaggcaaatccgatctccctgga
atcgacatctttgtgtcaactgctgatccagagaaggagccagtcttggtcactgcaaac
acaattctctccatcctcgcagctgactaccctgttgaaaagcttgcatgttacgtgtca
gatgacggaggggcattactcaccttcgaagcgatggctgaagcagcgagctttgccaat
ctctgggtgccattctgcaggaagcatgacatagaacccaggaaccctgacagctatttc
aacctgaagagagatcccttcaagaacaaggtgaagccgaactttgtcaaggacagaagg
cggatcaagcgtgaatatgatgagttcaaggtccgtgttaatggcctgccagatgccatc
cgccgtcgctctgatgcgtaccatgcccgtgaagagatccaggcaatgaaccttcagagg
gaaaagatgaaggctggaggtgatgaaccatttgagcctgtgaagattcccaaggcaaca
tggatggctgatggcactcactggcctggtacatggctccaaccctcacaggatcatgcc
cgaggagatcacgcaggaatcatacaggttatgctgaaaccaccaagtgacatgccgatg
tatgggaacatcaatgaaaagtcacctcttgacttcgcaggagtggataccaggcttcca
atgctggtgtatgtatcaagagagaagcgcccaggatatgatcacaataagaaagcaggt
gctatgaatgcactggtccgtgcatcagcaatcatgtccaatggtccattcattcttaat
ctggactgtgatcactatgtctacaactcaaaggccttaagggaggggatgtgcttcatg
atggaccgtggtggtgaccgcctctgctatgtgcagttccctcagcggtttgaaggtatt
gacccttctgatcgttatgccaaccacaatacagtgttctttgatatcaacatgcgtgca
cttgatggtctgcaaggaccagtgtacgttggtactggatgcctcttccgtcgaattgcc
ctttatggctttgacccacctcgttccaaggatcacagcccacgattctgcagttgctgt
ctcccacgccgccggaaggcatcagcttccaatgctaaccctgaggaaacaatggctctt
cgcatgggtgattttgatggtgatagcatgaacctcgcaacgttccccaagaagtttgga
aattcaagctttctgattgactccattccagtagcggaattccagggaagacccttggct
gaccatccatctgtcaagaatgggcgtccacctggtgctctaacgatccttcgtgatgtg
ctagatgcatccatcgtagcagaagcaatcagtgtgatctcatgttggtacgaggagaag
acagaatggggtataagggtggggtggatctatgggtctgtcactgaggatgttgtgaca
gggtaccgcatgcataatcgtggatggaagtcggtttactgtgtcacacagcgtgatgcc
ttccgtggcactgcccctatcaaccttactgaccgccttcatcaggtgcttcgatgggcc
actggttctgttgaaatcttcttctcccgtaacaatgcattgttcgccagctccaagatg
aaggttcttcaaaggattgcgtacctcaatgttggtatatatcccttcacatccatcttc
ctcattgtttactgcttccttccagcactctccctcttctcaggacagttcattgtgcaa
acactcaatgtcaccttcctgacatacctacttatcatcaccatcactctttgcctcctg
gccatgttggaaatcaagtggtctggcattgcacttgaggagtggtggcgaaacgaacaa
ttctggctcattggtggaactagtgcgcacctggctgctgtgctgcaaggtctcctgaaa
gtgattgcagggattgaaatctcatttacactcacttcaaagcaagtgggtgatgatgta
gaggatgaatttgcagaactctacatagtgaaatggacatcattaatgataccacccctc
accatcatcatgatcaaccttgttgctattgctgttggcttcagccgaacgatttacagc
acaattccacaatggagcaagcttcttggtggagtgtttttcagcttctgggtgcttgct
catttatatccatttgcaaaggggctcatgggcaggagaggaaggacacccactattgtg
tatgtctggtctggactcgtttccatcaccatctcattgctctggattgcgatcaaacct
ccatcacaagctgccaactcgcagttcggcgggtcgttttctttcccatga
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